Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0539 |
Symbol | |
ID | 4572548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 576551 |
End bp | 577726 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639754576 |
Product | SMC domain-containing protein |
Protein accession | YP_900228 |
Protein GI | 118578978 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATACGAA CGGTCAAAAT TGAAGGCTTC AAGTCGATCC CCTCCATGAT GCTTGATCTG GGGAGGGTCA ACTGCTTCAT TGGCGCCAAT GGGGTGGGGA AGTCCAATAT TCTGGAAGCA ATCGGAGTTC TGGGAGCCGC GGCAAAAGGG AGAATCGATG ACGAGTCCCT GGAATATCGT GGTGTCCGTC CCGGCTTGCC CCGGCTGTAC AAGGCATCAT TTGCCAATGA ACGCACCCCG CCGCATATCA TGGTAAGCGC CTCGGATGAT GTCAATGCCA CCTATCGCGT TTCATTGCTC AACCCACTGG AAAAGCCGGA GCCGGCTTGG TCCTACAAAA CGGAATACCT TTCGGATGGC GAAACCGAGC TCGTTTCCGT TGGCGTCCGA TCCGAAAAAA AGCTCACCCC GACGGCTGGA TTCGCCGCCC TCCGAATGGT TGATATCCCT GAGGGGAATT CAGCGCACCG CTTGATGGAC TGTTTGCAGA ACTTTGCGAT CTATTCACCC AATACCCTTA CCTTGCGCGC CCTGGTTGCG GATAAGCAGA CCCGTTTCCC GGTGGGACTT GCCGGCGGTC GTTTGGCGGA AGCATTCGGC GAACTGCGCA AACTGGTGCT GGATAAGGAT GATGATCTGC TGGACTCGGT TTTTGAGCTG GTCGAATGGG TCGCGGATAT CGATACCGGT CCGCCCGGAT CACTCATGTC TCCTTCGGTG CCGCGTACCA AGGAGATCAT CAGGTTTACC GACCGGTACA TGAATAAAAG CCGAAACACC CTGAGCGGCT ATGATGCCAG CGAGGGGGTC TTATATATTC TTTTCAGCGC AATTCTCTGT CTGACTCCCC ATTCCCCCCG GTTTTTTGCC ATCGATAACC TTGATCAGGC GCTTAATCCC CGACTGGTTA CCCGGTTGGT CAATAACCTG GCGACGTGGT TGGTCCGTAC GGATAATGAA CGACAGCTGC TTTTTACGGC CCATAATCCG GCGGTACTTG ACGGACTGGA TCTCTCGGAT GACAATGTCA GGCTCTTTGC CGTTGACCGG AACAGCGAGG GGCATACTCA AATTACCAGA ATTCAGTTGA GTGAAAAACT CCTGGCGCTG AATAAAGATT ATCCCCTGTC ACGGCTCTGG CTGATGGGAA ATCTGGGGGC TGTTCCCAAT GTCTGA
|
Protein sequence | MIRTVKIEGF KSIPSMMLDL GRVNCFIGAN GVGKSNILEA IGVLGAAAKG RIDDESLEYR GVRPGLPRLY KASFANERTP PHIMVSASDD VNATYRVSLL NPLEKPEPAW SYKTEYLSDG ETELVSVGVR SEKKLTPTAG FAALRMVDIP EGNSAHRLMD CLQNFAIYSP NTLTLRALVA DKQTRFPVGL AGGRLAEAFG ELRKLVLDKD DDLLDSVFEL VEWVADIDTG PPGSLMSPSV PRTKEIIRFT DRYMNKSRNT LSGYDASEGV LYILFSAILC LTPHSPRFFA IDNLDQALNP RLVTRLVNNL ATWLVRTDNE RQLLFTAHNP AVLDGLDLSD DNVRLFAVDR NSEGHTQITR IQLSEKLLAL NKDYPLSRLW LMGNLGAVPN V
|
| |