Gene Ppro_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0539 
Symbol 
ID4572548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp576551 
End bp577726 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content54% 
IMG OID639754576 
ProductSMC domain-containing protein 
Protein accessionYP_900228 
Protein GI118578978 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGAA CGGTCAAAAT TGAAGGCTTC AAGTCGATCC CCTCCATGAT GCTTGATCTG 
GGGAGGGTCA ACTGCTTCAT TGGCGCCAAT GGGGTGGGGA AGTCCAATAT TCTGGAAGCA
ATCGGAGTTC TGGGAGCCGC GGCAAAAGGG AGAATCGATG ACGAGTCCCT GGAATATCGT
GGTGTCCGTC CCGGCTTGCC CCGGCTGTAC AAGGCATCAT TTGCCAATGA ACGCACCCCG
CCGCATATCA TGGTAAGCGC CTCGGATGAT GTCAATGCCA CCTATCGCGT TTCATTGCTC
AACCCACTGG AAAAGCCGGA GCCGGCTTGG TCCTACAAAA CGGAATACCT TTCGGATGGC
GAAACCGAGC TCGTTTCCGT TGGCGTCCGA TCCGAAAAAA AGCTCACCCC GACGGCTGGA
TTCGCCGCCC TCCGAATGGT TGATATCCCT GAGGGGAATT CAGCGCACCG CTTGATGGAC
TGTTTGCAGA ACTTTGCGAT CTATTCACCC AATACCCTTA CCTTGCGCGC CCTGGTTGCG
GATAAGCAGA CCCGTTTCCC GGTGGGACTT GCCGGCGGTC GTTTGGCGGA AGCATTCGGC
GAACTGCGCA AACTGGTGCT GGATAAGGAT GATGATCTGC TGGACTCGGT TTTTGAGCTG
GTCGAATGGG TCGCGGATAT CGATACCGGT CCGCCCGGAT CACTCATGTC TCCTTCGGTG
CCGCGTACCA AGGAGATCAT CAGGTTTACC GACCGGTACA TGAATAAAAG CCGAAACACC
CTGAGCGGCT ATGATGCCAG CGAGGGGGTC TTATATATTC TTTTCAGCGC AATTCTCTGT
CTGACTCCCC ATTCCCCCCG GTTTTTTGCC ATCGATAACC TTGATCAGGC GCTTAATCCC
CGACTGGTTA CCCGGTTGGT CAATAACCTG GCGACGTGGT TGGTCCGTAC GGATAATGAA
CGACAGCTGC TTTTTACGGC CCATAATCCG GCGGTACTTG ACGGACTGGA TCTCTCGGAT
GACAATGTCA GGCTCTTTGC CGTTGACCGG AACAGCGAGG GGCATACTCA AATTACCAGA
ATTCAGTTGA GTGAAAAACT CCTGGCGCTG AATAAAGATT ATCCCCTGTC ACGGCTCTGG
CTGATGGGAA ATCTGGGGGC TGTTCCCAAT GTCTGA
 
Protein sequence
MIRTVKIEGF KSIPSMMLDL GRVNCFIGAN GVGKSNILEA IGVLGAAAKG RIDDESLEYR 
GVRPGLPRLY KASFANERTP PHIMVSASDD VNATYRVSLL NPLEKPEPAW SYKTEYLSDG
ETELVSVGVR SEKKLTPTAG FAALRMVDIP EGNSAHRLMD CLQNFAIYSP NTLTLRALVA
DKQTRFPVGL AGGRLAEAFG ELRKLVLDKD DDLLDSVFEL VEWVADIDTG PPGSLMSPSV
PRTKEIIRFT DRYMNKSRNT LSGYDASEGV LYILFSAILC LTPHSPRFFA IDNLDQALNP
RLVTRLVNNL ATWLVRTDNE RQLLFTAHNP AVLDGLDLSD DNVRLFAVDR NSEGHTQITR
IQLSEKLLAL NKDYPLSRLW LMGNLGAVPN V