| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0327 |
|---|
| Symbol | |
|---|
| ID | 4573128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 326306 |
|---|
| End bp | 327220 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754365 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_900019 |
|---|
| Protein GI | 118578769 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTAC TGGAACGGAT CATAGCCATC ATTCTGCCGG TGTTCATAAT CGTAGCTGCC
GGCTACGCCT ATGCCCGCCT GCGCGGCGAA ACGGCACGGG CGGACATGGG GGTGCTCAAC
CGCCTCAGCA GCGATCTTTT CTGCCCCCTG CTGGTCTTCA CCGCCCTGTC AGGCAGGGAC
TTCAGCCTGG CCGACAACGG CACGCTGATC CTGGCGGGCT TCCTGATATC TCTGGGCTCG
GGACTTCTGG CCTGGCCCGT TGCCCGCATG CTGGGCTACG ATGCGCGCAG CTTCGTCCCC
CCCATGATGT ACAACAACTG CGGCAACATG GGATTGCCCC TGGCACTGCT GGCCTTCGGC
CCCACCGGCC TGCCGGCCAT GATCGCGCTG TTCATGGCCT GCAACCTGGT GTTCTTCTCC
GTCGGCATCA AGATCCTGGA ATCGGGCCGC CACGGCGGCA AGGGTTCCCC CCTCTCCTTT
TTGGCCAGCC CGATGATGAT CTCCATCATC GCTGGGATTG CCTTCTCCCT TGCTAGGCTG
AGCGTAGCCG CGCCCCTGTT CAACGCCATG AAAATGATCG GAGACGCCAG CATCCCGATG
ATGCTCTTCG CCCTGGGCAT CCGCATGCTG GACGTCAATC TGGCCAGCTG GAAGATCGGC
CTCACGGGCG CCGCCTTCTG TCCCCTGGCC GGCCTGGCAG TGGCGTTCCT GCTGGAGTTC
GTGCTGCCGC TGACCGAGCG GCAGCGGGGG CTGATGTACC TGTTCGCTGC CCTGCCGCCG
GCGGTGTTCT GCTTCATGAT GGCCGAGCAG TACCGCCAGG AACCGGACCG GGTGGCCGCC
ATCGTGCTGC TGGGCAACCT GGCCTCGCTG CTGTTCGTGC CGCTGGGGTT GTGGATGGGT
ATGCGGGTGG GATGA
|
|---|
| Protein sequence | MALLERIIAI ILPVFIIVAA GYAYARLRGE TARADMGVLN RLSSDLFCPL LVFTALSGRD
FSLADNGTLI LAGFLISLGS GLLAWPVARM LGYDARSFVP PMMYNNCGNM GLPLALLAFG
PTGLPAMIAL FMACNLVFFS VGIKILESGR HGGKGSPLSF LASPMMISII AGIAFSLARL
SVAAPLFNAM KMIGDASIPM MLFALGIRML DVNLASWKIG LTGAAFCPLA GLAVAFLLEF
VLPLTERQRG LMYLFAALPP AVFCFMMAEQ YRQEPDRVAA IVLLGNLASL LFVPLGLWMG
MRVG
|
|---|
| |