| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0318 |
|---|
| Symbol | |
|---|
| ID | 4573119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 315530 |
|---|
| End bp | 316888 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639754356 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_900010 |
|---|
| Protein GI | 118578760 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGCG GTTTTTCCCC CGAAACGATC AAGGCGCTTG TGGATGCAGG CGGTTTTTTC
TTCTCGGTGC TCTCCGGCGC GGCCGCTGGC CTGTGGGCGC TGGTAAGGTG GCTCGACGAC
CGGCGCGACC AGCGACTTCA GGAGGAGCGG CTGGAATCTG CCCGTCTGGA TCAGAAGCGG
TTGGCGTCCG AGCAGGCCGA GCAGGCCCGT CGCGCCGAGC TGGAGCGGCG CGAACAGGAG
GAGCAGGGGC GGCGGGCCGA GCGGGCCGCC AACCTGATCT GCGAATTCAG CAAGTCCAAG
ACGCCGGAAG AGCGTGCCTG GACGGCCCTG GCCCTCGGCC TGTATCCGGA GGAGACCCTG
CGGCTTCTGG TCTGCTCTCT GGGGCAGTTC AGCGAGGAGA GCGTTCAGGG GGTGCAGCTG
GCTCTGGTCT CGTTCGGCAG CCGTGCTGTT GACGAGGTGG TCCGTCTCAA CCGGGTTGCC
CGCTCCTTCG AGGCGGACCG CGACGACGAG CCAGCTGACG GCGTCCCGCT GTACGATACG
GCCAGGCTGC TGGAGAGGAC CAAGGTCGTG CTCCAGCATA TCCTGCTGCA GATGCCGGCG
GAGCAGATTT CCCACCTTGT CCTGGAGGGG GTCGACCTGT CCGGGGCCCG TTTCCAGGGT
GCCGCGCTGC AGGGGGTGGG GTTCAATGAC TGCCGCCTGG AGGGGACGAT TTTCAAGCGC
GCCAATCTGC GCGGAGCCAG CCTGCGGGAG GTCTCCATCC GTGGCGCGCT ATTCACCAGG
GCATCCCTGA ACGGCGCCGA CTTCAGTGAT GCCTTTGGGG CGGCGGAGAT GATCAAGGTG
CACGCTGACG ATGCCCGCTT TGACCGGGCT TTGCTGCAGG AGACGAATTT CGACGGCGCC
AGTCTGAAGC GCGCCAGCTT CGTCCGGACG CAGCTGGAGG ATGCCTCCCT GCAGGGCGCC
CAGCTGCATG ATGCCCGCCT GGAAAACGCC TGGCTGGGAA GGGTGCATGG CCGCAAGCTG
GTGGCGCCGG AGGCGTCATT CCGCCATGTG AAGCTGCAGC ACGGGGATCT GGAAGAGGCC
CGCCTGACCA AGGCGCTCTT CGAACAGTGC GAACTGAACG GTGCCCGGGC CAAGGGAATG
GATGCCGATG GAGTCATCTT CAGAAACTGC AACCTGGGAG GGGTGGATTT CAGCGGATCA
CGCCTGGCCG ATGCCTGTTT TGCGGGTTGC AACCTGGGAG GCGCCGATTT CCGCGGCTCC
GTCCTGGAGG GGGCCGAGTT CAGGCACTGC ACCAATGGCG GCTCGGCCCA TTTCGACCAA
GCCGGACAAG ATGGGGCGCG CTTCGTTGAG TGCGGCTGA
|
|---|
| Protein sequence | MQSGFSPETI KALVDAGGFF FSVLSGAAAG LWALVRWLDD RRDQRLQEER LESARLDQKR
LASEQAEQAR RAELERREQE EQGRRAERAA NLICEFSKSK TPEERAWTAL ALGLYPEETL
RLLVCSLGQF SEESVQGVQL ALVSFGSRAV DEVVRLNRVA RSFEADRDDE PADGVPLYDT
ARLLERTKVV LQHILLQMPA EQISHLVLEG VDLSGARFQG AALQGVGFND CRLEGTIFKR
ANLRGASLRE VSIRGALFTR ASLNGADFSD AFGAAEMIKV HADDARFDRA LLQETNFDGA
SLKRASFVRT QLEDASLQGA QLHDARLENA WLGRVHGRKL VAPEASFRHV KLQHGDLEEA
RLTKALFEQC ELNGARAKGM DADGVIFRNC NLGGVDFSGS RLADACFAGC NLGGADFRGS
VLEGAEFRHC TNGGSAHFDQ AGQDGARFVE CG
|
|---|
| |