7 homologs were found in PanDaTox collection
for query gene Ppha_R0019 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_R0019  tRNA-Gln  100 
 
 
77 bp  153  7e-36  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_t33  tRNA-Gln  98.63 
 
 
77 bp  137  4e-31  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.00236306  n/a   
 
 
-
 
NC_010831  Cphamn1_R0049  tRNA-Gln  95.95 
 
 
73 bp  115  2.0000000000000002e-24  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.00100246  normal 
 
 
-
 
NC_008639  Cpha266_R0013  tRNA-Gln  94.81 
 
 
76 bp  113  6e-24  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.000776598  n/a   
 
 
-
 
NC_007512  Plut_R0042  tRNA-Gln  94.59 
 
 
73 bp  107  4e-22  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000577452  normal  0.10312 
 
 
-
 
NC_011059  Paes_R0021  tRNA-Gln  94.37 
 
 
73 bp  101  2e-20  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.0000000000023675  normal 
 
 
-
 
NC_010803  Clim_R0025  tRNA-Gln  94.59 
 
 
72 bp  99.6  9e-20  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000105341  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>