| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2896 |
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| Symbol | |
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| ID | 6461901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2980160 |
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| End bp | 2981554 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642729042 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_002019656 |
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| Protein GI | 194337862 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCA AGGGTAAAAG GGTGTCGGTC ATTGGCGCGG GCAAAAGCGG AATTGCGGCA
GCGCAACTGC TTGCTCGCAA AGGTGCGACG GTTTTTGTCA GCGAGCTTGG AACCATGGGG
GCAGAGGAGA TGCAGCATCT CCGGGAGATG CAGATCCCTT TCGAAGAGGC GGGGCATTCG
CCTGCGGTGT ATGAGGCTGA TTTTTGTGTC ATCAGTCCGG GTATTCCCCC TCATGCCGAG
GTTGTGACAA CCCTGCAGGC GCGAAATATT CCTCTCTACA GTGAGATTGA GTTGGCGAGC
CGTTTTTGCA AGGCGAGAAT TGTTGGTATT ACCGGTACGG ATGGAAAAAC CACCACCTCG
ACGCTTGTTC ATGCTCTCTG TGAAGAGGAT GGCCTCCGGA ATGGTTACAG GGCTTACAGT
GTCGGCAATA TCGGTGTGCC ATTTTCTTCA ATGGTATTGG ATATGAAGGC TGGTGATATT
GCCGTGGTCG AGTTGAGCAG CTATCAGTTG GAGCGCTCAC CCACTCTCAA GCCTGAGGTT
GCTGTTATCA TGAACATTAC GCCGGACCAT CTCGATCGCT ATGCAGGAGA GCTGCAGGGC
TATGCTGCGG CCAAGTTCAG GATTTATGCC AATCAGGGTG CCGGGGATAC ACTGATCTAC
AATGAGGACG ATGCGCTGCT CAGGGAACAT TTTGCCTGCA GGGATCAGTT TCCTTTCAAC
ATTATGTCGT TCGGCATGGA ACCTGCCTGC AAGGGAGTTC CTGACATTCG AACATTTTTT
CTTGAGGGCG ACACGCTTGT TGCCCATACG CCTGACGGGG ATGAGCCTGT TCTTGTGACA
TCAGATTTTC TGAAAAAAAG TTTTCGTGGT CGCCACAATA TCTCAAATGT ACTTGCGGCT
GTTGCTGTTG CAGGAGCTTT GGGTATTCAA CGGGAAGTGG TTTGTCAGGT AATCAGGGAG
TTCAGGGGTG TTGAGCATCG TCAGGAATTT GTCATGACCA TCAATGGAGT CGACTGGGTT
AATGATTCCA AAGCGACAAA CATGAATGCG TTGCGTCAGG CGCTTGAAGC GCTTCCTGCT
ACTGCGGTAC TTATTGCCGG AGGACGCGAC AAGGGGAATG ATTACGCTGC GATTACCAGA
CTTGTCGAGA AAAAGGTATC TTTGCTCATT GCTTTGGGTG AATCGCAGGA CAAGATCGTT
TCAGCCTTTA AGGATGTTGT TGCTGTCAAG GCGGCAGGAT CGCTTGAAGA TGCGGTTTTG
TTGGCACGAG ATGCGGCAAG CTCCGGGCAG ACGGTGCTCT TTTCACCCGG GTGCGCAAGC
TTTGATATGT TTAAAAATTT TGAGGATCGC GGTATGCAGT TTAAACAATG CGTTCATCAG
TTATCATCAT GGTGA
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| Protein sequence | MDLKGKRVSV IGAGKSGIAA AQLLARKGAT VFVSELGTMG AEEMQHLREM QIPFEEAGHS
PAVYEADFCV ISPGIPPHAE VVTTLQARNI PLYSEIELAS RFCKARIVGI TGTDGKTTTS
TLVHALCEED GLRNGYRAYS VGNIGVPFSS MVLDMKAGDI AVVELSSYQL ERSPTLKPEV
AVIMNITPDH LDRYAGELQG YAAAKFRIYA NQGAGDTLIY NEDDALLREH FACRDQFPFN
IMSFGMEPAC KGVPDIRTFF LEGDTLVAHT PDGDEPVLVT SDFLKKSFRG RHNISNVLAA
VAVAGALGIQ REVVCQVIRE FRGVEHRQEF VMTINGVDWV NDSKATNMNA LRQALEALPA
TAVLIAGGRD KGNDYAAITR LVEKKVSLLI ALGESQDKIV SAFKDVVAVK AAGSLEDAVL
LARDAASSGQ TVLFSPGCAS FDMFKNFEDR GMQFKQCVHQ LSSW
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