| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2823 |
|---|
| Symbol | |
|---|
| ID | 6460921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2910860 |
|---|
| End bp | 2911753 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642728974 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002019589 |
|---|
| Protein GI | 194337795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG TAAAGTTCAA CCCAAAGGAT ATTCTTTATC ACTACTGCTC AACAGAGGCG
TTTCATTCCA TTGTGACAAC GCACTCGATT CGCCTTTCAT CAATGTCGTT GTCGAATGAC
TCGATGGAAG GAAAAATGGT AGAAGAAGCA CTCGCCCGTC TCGCCGAATG CGATAAGTGT
GATCAAGGTA CAATTTCGCT TTTACAGGCA CAGTTTGAAG TATATCTCAA AGATGTTGAT
GGATTTGGTT TTTGCCTGTC CAAAAAGAGA GAGCTACTCA GCCAGTGGAG AGCATATGCT
TCCGATGCAA CTGGTGTTGC CATCGGATTT TCACGTGATT ATCTTGAATT GCTTCGAGAA
GAATATCTTC GCCAAAGAGA TCCGTTTCTT GGATTTACTA TTGCAGAGGT AATGTATGAT
CCCGAAGATC ATGAGAAGCA GGTTCGGCCT CTGTATCAAC AGATTAAACA CGCCATTGAT
GAAGGGGATT TACTTGAAGC CAAAAAGCAT TCGCCCCTTC GTTCATGGAG TAACGATACT
GAAACTCAGA GAAAAAAATC GTGTCTGGCA TCTCTTGGTT TCTCTACGTT AATGGCTACA
CTCGCATTTG CTTTTGTTCT TAAATCTGAA GCATTTAAAG AAGAGGATGA GCTGCGGTTG
CTTGCATTAA TTAATCGGGG GGAGATAAAA AAGTTAGGTT TTGACGTAAA GTCCAATAGC
CTTAGACCAT ACAGGGAATA TGAATTAAAA AAGTTTGATC AGTGCACTCC TGTCATCAAG
GAGGTTATTC TTGGCCCAAA ACACCGCTCG CCGATTTCTG TGGTGGAAGA TTTTTTAAGA
TGTAATGGAT TTGGGTATGT ACATGTCAGC CGTTCAGCAG TACCGTATCA ATAA
|
|---|
| Protein sequence | MATVKFNPKD ILYHYCSTEA FHSIVTTHSI RLSSMSLSND SMEGKMVEEA LARLAECDKC
DQGTISLLQA QFEVYLKDVD GFGFCLSKKR ELLSQWRAYA SDATGVAIGF SRDYLELLRE
EYLRQRDPFL GFTIAEVMYD PEDHEKQVRP LYQQIKHAID EGDLLEAKKH SPLRSWSNDT
ETQRKKSCLA SLGFSTLMAT LAFAFVLKSE AFKEEDELRL LALINRGEIK KLGFDVKSNS
LRPYREYELK KFDQCTPVIK EVILGPKHRS PISVVEDFLR CNGFGYVHVS RSAVPYQ
|
|---|
| |