Gene Ppha_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2720 
Symbol 
ID6462640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp2811384 
End bp2812025 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content47% 
IMG OID642728880 
Productbeta-lactamase domain protein 
Protein accessionYP_002019495 
Protein GI194337701 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.373354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTCA AACAGTTTCG GACAGGTGGC GACAGAAATT TTGGTTACCT CGTTGCTGAT 
GAAGTTTCAA AAGAGGCCAT AGTCATTGAC GCTTCTTTCA ATCCCGCCAT TATTGTGCAG 
TTTGCTGCCG AACAGGGATT TGTGATCCGT TTTGTTTTTT CAACTCACGG TCATGACGAT 
CATACCAATG GGAATGAGGC TATTGGTGTG ATGACAGCTC TTTCTCCCCT GCTTTTCGGT 
GATACCTGTC CGAGGACAGG TATTACCGTT GAGGATGGAG CGCTCTTTCC TCTTGGTTCT 
CTTGAGGCTC GTATTCTTCA TACACCAGGA CATACGGCGG ATTCCATTTG TATTCATGTT 
GGTGATGCTC TTTTTACTGG TGACACCCTT TTTACAGGGA AGGTGGGCGG TACCGGCACA 
GAAGAGCAGG CGTTTGCTGA ATACCATTCG TTGCAGGATA AACTCATGTT GCTGCCGGCA 
GAGACAACAG TCTACCCCGG TCACGATTAC GGCCTGTCGC CGATTTCATC AATCAGCAGG 
GAGCGTGCTT CCAATCCTTT TTTGCTGCAG GGTGATTTCA ATGCATTTCT TGCTCTTAAA 
CAGAACTGGG CAGCATATAA AAAGAGGCAT GGAATTGCAT AA
 
Protein sequence
MIVKQFRTGG DRNFGYLVAD EVSKEAIVID ASFNPAIIVQ FAAEQGFVIR FVFSTHGHDD 
HTNGNEAIGV MTALSPLLFG DTCPRTGITV EDGALFPLGS LEARILHTPG HTADSICIHV 
GDALFTGDTL FTGKVGGTGT EEQAFAEYHS LQDKLMLLPA ETTVYPGHDY GLSPISSISR 
ERASNPFLLQ GDFNAFLALK QNWAAYKKRH GIA