| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2607 |
|---|
| Symbol | |
|---|
| ID | 6461522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2694864 |
|---|
| End bp | 2696648 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642728763 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase |
|---|
| Protein accession | YP_002019385 |
|---|
| Protein GI | 194337591 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAA ATAAAGAACA ACTGAACTCC GGATGCGAAA CACCAAAGGA GGAGCCCACT
GTGAAAAGTA CCGAAACGAC CTACACCGGA ATTGGCGCAT CGAGAGGAAT TGCTGTCGGA
GAGTGCTACA GCTTCGTCAA GGAGGAGAGT AATCATGAAA TCAGGGAGCT GAATGACAAA
AACACGGGTG AGGAGATTGA GCGTTTTCTC TCTGCCCTGC ACCGGTCGGC ACATGAACTG
AAGAAAATTG AGCAGGTAAC GATAAGAAAA CTGGGAAAGG GCTACTCCAA TCTCTTTGAG
GCCCAGATCA TGATACTGCA AGACCCGGTG CTGATTGATG CCATTGCCGG ACGTATTCAA
TCAGAACACA AACCGGCGCA TTTGGTCATT GAGGAGGAGT TCGATCAGTA TCTTGAAAAA
TTCAAAAATT CCGACGACCT GATTTTCCAG GATCGGGCTG ATGATCTGCA CGATATCAAA
AACCGGATTA TCAGAAACCT GCACGTCAGA AAACTGCATT CATGGATACC TGAAGGGGTA
ATTGTTGCTT CAAACACTCT CTCCCCTGCT GATATCATTC TTTTAAGCCG CAGCAATATC
AAGGGATTTA TCACCGATAC AGGGGGGAAA ACTTCGCATA TCGCCCTGAT ATGCCGCTCT
CTGAACATTC CCATCATTGT CGGGCTTGGC AATATCTCCC AGAAGGTATC GACCGGAATG
CCGATGATCA TTGATGGAAC GACGGGAACC GTGATTACGA ATCCTGAGGA AGAGACTCTT
GCTCGCTACC TCAGAAAAAA TGAGGAGGCT CAAAAAAGTG ATGCCGACAG CTCCCTGATG
GCCGCGCTTC CTGCTACAAC AAAGTGCGGT GTCAGAATCA CCTTTTATGC CAATATTGAC
TTCAAGGAGG AGTTGCAGGC TCTGACTGCT GCCGGCGCTG AGGGAGTGGG GCTGTTCAGA
AGCGAAAATC TCTTTACCGA GGGAACAAAA GTTCCCAAGG AGTCTGAACA GTACCATTAT
TACCGGGAAA TGGCTGAGGA GATTGCTCCG ATGCCTCTTG ATATCCGCCT CTTTGATATT
GGGGGTGACA AGCTGATGTA CTCTCCGGTC AAGGAACAAA ATCCGAACCT CGGCTGGAGG
GGTATCCGGA TCCTGATTGA TCTGCCGGAA ATACTTGATG CACAGATCCG GGCTGTCATC
CGGGCTAATG TCCATGGAAA CCTTGATATC CTCATTCCCA TGATCATCTC GGTCGATGAG
GTACTTAAAG TAAGGGCAAT TGTCGATCGC CACTATGCGG AGCTTTCCAG TGAGTGTAAT
TCGCAGGTTG AAAAACCGGG TATCGGCGCA ATGATCGAGG TACCTGCGGC GGTCGAACTC
ATTGATGAAA TAACGCGGTG TGTTGACTTC ATCAGTATCG GCACCAATGA CCTGACGCAG
TACACGCTTG CCGTGGACCG CAACAACGTT ATCGTGCAGG ATCTCTTTGA AAAATTTCAT
CCGGCGATTG TCCGCCAACT GCACCGGGTG ATAGCAGTTG CCCACAAAAA CCATTGCAAG
GCGATGATTT GCGGCGATAT GGGTTCCGAC CATCTCGCCC TGCCTTTTCT GCTGGGCTGT
GGACTCAGAA AATTCAGTGT TGTCGCTTCG GATATTCCGA AACTCAAATC ACTGGTGTCG
CGCTACTCCA TTGCTGAAAC GGAAGCACTC GCACGCGAGT GCCTCACGTT TGGCAGCTCA
GCCGAAATCA AAGCCTGCAT GGAGGCTTTC GAGGCAGCTC ATTAA
|
|---|
| Protein sequence | MPENKEQLNS GCETPKEEPT VKSTETTYTG IGASRGIAVG ECYSFVKEES NHEIRELNDK
NTGEEIERFL SALHRSAHEL KKIEQVTIRK LGKGYSNLFE AQIMILQDPV LIDAIAGRIQ
SEHKPAHLVI EEEFDQYLEK FKNSDDLIFQ DRADDLHDIK NRIIRNLHVR KLHSWIPEGV
IVASNTLSPA DIILLSRSNI KGFITDTGGK TSHIALICRS LNIPIIVGLG NISQKVSTGM
PMIIDGTTGT VITNPEEETL ARYLRKNEEA QKSDADSSLM AALPATTKCG VRITFYANID
FKEELQALTA AGAEGVGLFR SENLFTEGTK VPKESEQYHY YREMAEEIAP MPLDIRLFDI
GGDKLMYSPV KEQNPNLGWR GIRILIDLPE ILDAQIRAVI RANVHGNLDI LIPMIISVDE
VLKVRAIVDR HYAELSSECN SQVEKPGIGA MIEVPAAVEL IDEITRCVDF ISIGTNDLTQ
YTLAVDRNNV IVQDLFEKFH PAIVRQLHRV IAVAHKNHCK AMICGDMGSD HLALPFLLGC
GLRKFSVVAS DIPKLKSLVS RYSIAETEAL ARECLTFGSS AEIKACMEAF EAAH
|
|---|
| |