Gene Ppha_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2604 
Symbol 
ID6461516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2691412 
End bp2692689 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content53% 
IMG OID642728760 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 
Protein accessionYP_002019382 
Protein GI194337588 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGGAAA GAACCATTCA GCAACAAACT CCGGGGGTAA CCATCTTGAG GGGAAAAAAC 
ATCATCGTTG GCATTTGCGG AGGCATTGCT GCCTATAAAA TACCGCAATT GGTCAGGCTG
TTAAAAAAAC AGGGGGCCAA CGTCAGGGTG GCGCTGACGG AGGGTGGCGC CCGTTTTGTG
AGTGAACTCG CACTTGCAAC CGTTTCGGAA GAGAGGGTCT ATCGCAAAAT CCTGCCCCCG
CTGGAGGAGG AGGGGATGGA TTTCACGCGC CATATCTCTC TTGGGGAGTG GGCCGATGCC
CTTGTTATCG CACCGGCTAC GGCAAATACG CTTGCAAGGC TTAGTGCAGG TCTTTGCGAC
GATATGCTTG CCGCTCTTTT TCTGACGCTT CGTCCAGCCA AACCGGTGCT GATTTTTCCG
GCCATGGATG GCCAGATGTT TCTGTCACCC TCGGTACAGC GGAATATAGC AACCCTTGCA
GCCCAGGGCT GCCTTGTCAC CAACCCTGAA AGCGGTGAGC TTGCCTCAGG GCAGTGTGGC
GTTGGCCGAA TGCCCGAGCC CGAGGCCATC CTTGCCGCTC TTGAGGCGGC GCTGCACAAC
TCCGGAAGCT CTCCGCTTCA GGGAAAATCG GTCGTGATCA CAGCAGGGCC AACTCGCGAA
AAAATTGATG GCGTCCGTTT CATCTCCAAC TACTCTTCGG GAAAAATGGG TTTTGCCATC
GCTCGTGCTG CCGAAAAACG CGGAGCCCTC GTCACGCTCA TTACCGGACC GGTTCATCTT
CCTGCACCTC CCGGCGTAGA GCGTCTTGAT GTTGAAAGCG CTCTGGAAAT GAACGCTGCT
GCCGAAGTTT TTTTCGGAAA ATGCGACCTC TTTATCGGCG CGGCTGCCGT CTCCGACTAT
CGCCCCGCAA CACCCATTGA GGGAAAAATT AAAAAGGGTG CTGAGAATAT TGAGCTGACC
CTTGTTAAAA ATCCGGATAT CCTTGCCGGA TTTGGTCGGC AGAAAAGCTC CGCTCAGCTT
GCGGTGGGAT TTGCCCTTGA AACCCGCACA GGCCTGGATA ATGCACGCAA AAAACTGGCA
GAAAAAAATC TTGACCTTAT TGCCTTTAAT TACTTCGATC GCAAAAATTC GGGTTTTGAT
GTCGATACAA ATATTCTTAC CCTGATAGGA TGCGATGGGA TGACAACGGA GCTCCCTCTG
CTGACCAAAG ATGCTGCTGC TGAAAAACTT CTTGACGCCA TAGAACAGCT TTGCCTCGAA
AGAGCCCTTA ACCTCTGA
 
Protein sequence
MAERTIQQQT PGVTILRGKN IIVGICGGIA AYKIPQLVRL LKKQGANVRV ALTEGGARFV 
SELALATVSE ERVYRKILPP LEEEGMDFTR HISLGEWADA LVIAPATANT LARLSAGLCD
DMLAALFLTL RPAKPVLIFP AMDGQMFLSP SVQRNIATLA AQGCLVTNPE SGELASGQCG
VGRMPEPEAI LAALEAALHN SGSSPLQGKS VVITAGPTRE KIDGVRFISN YSSGKMGFAI
ARAAEKRGAL VTLITGPVHL PAPPGVERLD VESALEMNAA AEVFFGKCDL FIGAAAVSDY
RPATPIEGKI KKGAENIELT LVKNPDILAG FGRQKSSAQL AVGFALETRT GLDNARKKLA
EKNLDLIAFN YFDRKNSGFD VDTNILTLIG CDGMTTELPL LTKDAAAEKL LDAIEQLCLE
RALNL