Gene Ppha_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2425 
Symbol 
ID6461203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2507818 
End bp2508885 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content48% 
IMG OID642728608 
Producthypothetical protein 
Protein accessionYP_002019230 
Protein GI194337436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.644391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TGACATCCAT TGTTGCCCTC ATAACGATGA CTCTTGCTCT GGGAACGAAC 
GTTTCTGCCG AAGAACTCAC ACGGAAAAAC CCTCTCCCCG ATCAAAGCTT CCTGCATCTG
GCAGCGAGGA GTAATAACTA TATCGGCAAC AAAGAGCTGA TAACCTATCA GGCAGTTCCC
GTCAAAATGC TCAATCAGAG CGATGCGCAA GAACTATTGG GACGAATCAT GAAGAGTTCG
CGTGAAAACA ACAGCTCTTT TGAAAACGTT CAGCAACTGA CTGGTCGCTT TATCTTTACC
TCCGCAAACG ATCCTTCTGC GGTCTTTGAC ATCGATCAAC AGAACGGCAG CTTTCTGCTG
AACTTCGGTC TCGGAAAATA TGCAGCCGAA GAGTCAACAA GCAACCTCCC TTCAGTGCAG
GCGGCTCCGG AACTGGCCAG AAAATACCTT TCAGAAACAG GCAATATGCC AAAAAAGAGC
AAAGAGATGC TCGTGGCACA TGTTGGCGGT CTCGACATGA GTGTTTCGAA AGAGGGGAAA
AGTACCGGCG CCTACAAAAA GCTGGTTACG GTGCAATTCA GCCGCAAGTT GAATGGTCTG
CCTGTCCAGG GGCCTGGCTC GCGAATAGTG ATGCATCTGG GTGAAAATGG CAACCTGACC
GGTATGATCC GTAACTGGCC TGAAGTGGAA GCACGAAAAA TTCAACCAGC CGAACTGAAA
AGCAATGAGC TCATCCGGAA GGATATCCAG AATCAGCTCT GCATGTTGAC CGGACATTCG
GAAAAAAACA CCGCTCAAAA ATCAACCCTC GTGCTCTTTG ATGATGGCAG AGGCGTTATC
GAACCAGCAC TCTTCGTTAC TGCCAAAGCT CTCTATCAGG GCCCGAATAA TCGTGAAGTC
ATAGAGATCC CTGTTGATTT CTACGTCCCG CTTCTCAGAA AACCGAAAGC CTACTATCCA
TTCATGCAAT CCCTCGACTC CAAAATCCCC GGAATCGACA AACAGCAAAA ACCATCAGAA
ACCATTCTTT CTCCCAAAAC CGGAGAAGGA CAATCAGATA TGCGATAA
 
Protein sequence
MKKMTSIVAL ITMTLALGTN VSAEELTRKN PLPDQSFLHL AARSNNYIGN KELITYQAVP 
VKMLNQSDAQ ELLGRIMKSS RENNSSFENV QQLTGRFIFT SANDPSAVFD IDQQNGSFLL
NFGLGKYAAE ESTSNLPSVQ AAPELARKYL SETGNMPKKS KEMLVAHVGG LDMSVSKEGK
STGAYKKLVT VQFSRKLNGL PVQGPGSRIV MHLGENGNLT GMIRNWPEVE ARKIQPAELK
SNELIRKDIQ NQLCMLTGHS EKNTAQKSTL VLFDDGRGVI EPALFVTAKA LYQGPNNREV
IEIPVDFYVP LLRKPKAYYP FMQSLDSKIP GIDKQQKPSE TILSPKTGEG QSDMR