Gene Ppha_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2388 
Symbol 
ID6463088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2475790 
End bp2476110 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content46% 
IMG OID642728573 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002019196 
Protein GI194337402 
COG category[R] General function prediction only 
COG ID[COG2522] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.673915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATTTC CTTGTGAAAA AGCCGTATGG TATCATCTTC CTCAAATCAG GGCTGATCTT 
GCTATTGAAT TGGTGAAAAC GGGGTTGACC CAGTCGCAGG CGGCGAAAAA GCTTGGCGTT
ACGCCTGCTG CTGTCTCCCA GTATATTCAT AAAAAACGGG GCATGCAATT GCTGAAAAGC
ATAAACTACC GCAAGGAGAT TGATATTGCA GTTCAGAAAA TCCTTGAAGA TGCCTCCTCC
AATGATCTTC ATCGGATTGT CTGCAACTGC TGTCGTCTGC TGCAAGAGGA GGGTGAACAT
GTTGTGTGCG GTGGTGATTA A
 
Protein sequence
MIFPCEKAVW YHLPQIRADL AIELVKTGLT QSQAAKKLGV TPAAVSQYIH KKRGMQLLKS 
INYRKEIDIA VQKILEDASS NDLHRIVCNC CRLLQEEGEH VVCGGD