Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2388 |
Symbol | |
ID | 6463088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2475790 |
End bp | 2476110 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642728573 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002019196 |
Protein GI | 194337402 |
COG category | [R] General function prediction only |
COG ID | [COG2522] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.673915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATATTTC CTTGTGAAAA AGCCGTATGG TATCATCTTC CTCAAATCAG GGCTGATCTT GCTATTGAAT TGGTGAAAAC GGGGTTGACC CAGTCGCAGG CGGCGAAAAA GCTTGGCGTT ACGCCTGCTG CTGTCTCCCA GTATATTCAT AAAAAACGGG GCATGCAATT GCTGAAAAGC ATAAACTACC GCAAGGAGAT TGATATTGCA GTTCAGAAAA TCCTTGAAGA TGCCTCCTCC AATGATCTTC ATCGGATTGT CTGCAACTGC TGTCGTCTGC TGCAAGAGGA GGGTGAACAT GTTGTGTGCG GTGGTGATTA A
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Protein sequence | MIFPCEKAVW YHLPQIRADL AIELVKTGLT QSQAAKKLGV TPAAVSQYIH KKRGMQLLKS INYRKEIDIA VQKILEDASS NDLHRIVCNC CRLLQEEGEH VVCGGD
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