| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2331 |
|---|
| Symbol | |
|---|
| ID | 6462429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2406935 |
|---|
| End bp | 2407363 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728520 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002019143 |
|---|
| Protein GI | 194337349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00643489 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTGC ATAAGGATAT TGACTATCGG CTTGAACTCG CCCGCGGGTT CTTGCAGGAG
GCGGAGCAGG ATTACGCTCT CGGGCGCTGG CGTGCCTGTG TTTCGGGCTC CATACTTGTT
CTTGAAAATA CCGGTCTTGC TGTATTAATG CTTTTTGGTG TCTCACCGTT GACCCATAAG
CCGGGCAAGC ATTTATCACA ACTGATAATG GAAGGTACGG TCACCAAAGA GGTTGCTGCC
TTGATTGAAC AGATTTTGCC TGATTTTGAA AAATATGATT CCCATGAAAA GATGCTGGCG
AGGTATGGCA ACGAGTCGTC ATACCAGCTT CCCTGGGCGC TCTTTCATGA AGAGGAGGGT
ATCACGGCTA TTGAGGCTGC CCGCAAGTCG ATGCGTGTGA GTTCCGAACT GGCTGAATTG
GTTCAGTAA
|
|---|
| Protein sequence | MGLHKDIDYR LELARGFLQE AEQDYALGRW RACVSGSILV LENTGLAVLM LFGVSPLTHK
PGKHLSQLIM EGTVTKEVAA LIEQILPDFE KYDSHEKMLA RYGNESSYQL PWALFHEEEG
ITAIEAARKS MRVSSELAEL VQ
|
|---|
| |