Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2259 |
Symbol | purH |
ID | 6462198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2343121 |
End bp | 2344698 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642728447 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_002019071 |
Protein GI | 194337277 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00898643 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATC CTGTCATCAA GCGGGCGCTG GTCTCTGTAT CTGATAAAAC CGGTATTGTT GAATTTTGCC GGGAGTTGAG TGGCATGGGC GTTGAAATTT TCTCAACAGG GGGTACCTTG AAGTCGCTTC AGGATTCAGG AGTCAGCGCA TCCTCCATCT CCACCATTAC CGGATTTCCG GAAATCATGG ATGGACGGGT CAAAACCCTG CACCCGAAAA TACATGGTGG ACTGCTTGCC GTAAGGGAGA ATCCGGAGCA TGTCAAACAG GCTACGGAGA ACGGTATCAG CTTCATTGAT CTTGTTGTCG TCAACCTTTA TCCTTTCGAG GCTACAGTGG CAAGGCCGGA TGTAACCTTC GAGGATGCTA TAGAGAATAT TGATATTGGT GGTCCATCCA TGCTGCGCAG TGCAGCCAAG AACAACGAAT CGGTAACGGT GGTAACCGAT AGTGCCGACT ACGCTCTTGT GCTGCAGGAG ATGCGTGAGC ATAACGGTGC GACAAAAAGA ACGACCCGTC TGACGCTTGC CCTGAAAGTA TTTGAACTCA CCTCCCGTTA TGACCGTGCC ATTGCCTCTT ACCTTGCCGG AGCAGTCGCA GGAGAGCAGC AGGGTGCGGC CTCAAAGATG ACGGTCACTC TTGAGCGTGA GCTCGATATG CGTTACGGTG AAAATCCGCA CCAGAGCGCA GGGCTTTACC GCCTGACCGA TGAGAACGGA ACACGCTCCT TTGGCGACTT TTTCGAGAAG CTGCATGGCA AGGAGCTCTC CTACAATAAT ATGCTCGACA TCGCTGCAGC AGTCTCCCTG ATTGAGGAGT TCCGTGGAGA GGAGCCGACA GTGGTCATTG TCAAACACAC CAACCCCTGT GGTGTCGCTC AGGCCCCGAC CCTTGCCGAA GCCTACCGCA GGGCATTTTC AACCGATACC CAGGCTCCTT TTGGTGGAAT TATCTCCTTT AACCGTCCTC TCGATATGGA GGCAGCAAAG GCGGTCAATG AAATTTTCAC CGAGATTCTC ATTGCTCCCG CTTTTGAGGA TGGCGTGCTT GAGATGCTGA TGAAGAAAAA AGATCGCAGG CTGGTGCTGC AGACGAACGC TTTGCCCAAA GGTGGCTGGG AGTTCAAGTC AACCCCGTTC GGGATGCTTG TTCAGGAACG TGACAGCAAA ATCGTTGCAA AAGAGGATCT GACGGTTGTA ACCAAACGGC AGCCGACAGA AGAGGAGATT GCCGACCTGA TGTTTGCCTG GAAAATCTGC AAGCATATCA AGTCGAACAC CATTCTCTAT GTCAAGAATC GTCAGACATA CGGCGTCGGC GCTGGACAGA TGTCGCGCGT TGACTCCTCC AAAATTGCAC GTTGGAAGGC CTCTGAAGTT AGTCTCGACC TGCATGGATC GGTTGTTGCT TCGGATGCGT TTTTCCCCTT CGCTGATGGC CTGCTTGCCG CTGCCGAAGC TGGTGTTACC GCAGTCATTC AGCCTGGTGG CTCCATTCGC GATAACGAGG TGATTGAAGC AGCCGATGCC AACAACCTTG CGATGGTCTT TACCGGAATG CGTCACTTCA AGCATTGA
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Protein sequence | MSDPVIKRAL VSVSDKTGIV EFCRELSGMG VEIFSTGGTL KSLQDSGVSA SSISTITGFP EIMDGRVKTL HPKIHGGLLA VRENPEHVKQ ATENGISFID LVVVNLYPFE ATVARPDVTF EDAIENIDIG GPSMLRSAAK NNESVTVVTD SADYALVLQE MREHNGATKR TTRLTLALKV FELTSRYDRA IASYLAGAVA GEQQGAASKM TVTLERELDM RYGENPHQSA GLYRLTDENG TRSFGDFFEK LHGKELSYNN MLDIAAAVSL IEEFRGEEPT VVIVKHTNPC GVAQAPTLAE AYRRAFSTDT QAPFGGIISF NRPLDMEAAK AVNEIFTEIL IAPAFEDGVL EMLMKKKDRR LVLQTNALPK GGWEFKSTPF GMLVQERDSK IVAKEDLTVV TKRQPTEEEI ADLMFAWKIC KHIKSNTILY VKNRQTYGVG AGQMSRVDSS KIARWKASEV SLDLHGSVVA SDAFFPFADG LLAAAEAGVT AVIQPGGSIR DNEVIEAADA NNLAMVFTGM RHFKH
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