| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2174 |
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| Symbol | |
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| ID | 6461856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2259483 |
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| End bp | 2261054 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642728370 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002018994 |
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| Protein GI | 194337200 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGAAAG AGAAGATAAT CGTATTTGAT ACAACCCTGC GCGACGGAGA GCAATCCCCC
GGGGCCTCGC TCAATGTGCA GGAAAAGGTA GAAATTGCCC GGCAGCTTGA AAAACTTGGG
GTAGATGTGA TAGAGGCTGG TTTTCCGGCT TCATCACCCC TGCAACTTGA AGCGGTTCAG
CGGGTAAGCG CAGAGTCCAA AGCCGTTGTG GCCGCACTGG CCAGAGCGGT GGAAAAGGAC
ATTACCGCCG CCTGGAAGGC GCTGCAGCAG GCACGCAAAC CCCGCATTCA CACCTTTATC
GGCACCTCCG ATATTCATAT CACCGGGAAA TTCGGCAGTG ACCGTTACGG CCTCAGCCTG
CAGGAAAAGC GGCAAACCGT TCTCAACATG GCGGTGAACG CCGTAACCTT TGCCAAAACC
TTCACTTCGG ATATTGAATT TTCCGCTGAA GATGCAGGAC GCACCGATCA GGGTTTTCTC
GCAGAAATCA TCGAAGCCGT TATTGCGGCA GGTGCAACCA CCGTCAACAT TCCCGACACC
ACAGGCTATA CCTGGCCTTC AGAATTTGGC CGGAAAATAG CCGACCTCCG GAGCCGCGTC
AGCAACATCG GCAATGCCAT CATCAGTGTC CACTGCCATA ACGACCTCGG TCTTGCCGTA
GCAAACACAC TCAGTGCAGT TGAACATGGC GCTCGTCAGG TGGAGTGCTC CATGAACGGC
ATCGGAGAGC GGGCCGGAAA CGCTTCGCTC GAAGAGATTG TGATGGCGCT GAAAGTACGC
AGCGACCTGC ACAACTTCTA CACCGATATC GTCACCGAAG AGCTCTACAA TACGAGCCGT
ATGGTCTCGA CCTTTACCGG CATCATTATC CAGCCCAACA AGGCAATTGT TGGCGACAAT
GCATTTTCAC ACGAATCGGG CATTCACCAG GACGGGATGC TGAAAAACCG GCAAACCTAT
GAGGTGATGA CACCTGAATC GGTAGGAGTG CCGCAAACAA GCATCGTGCT TGGCCGCCAC
TCCGGCAAAC ACGGTCTCTC ATCCCGTCTT CTGAGCCTTG GCTATAACCT TGATGATACC
GAACTCGAAG CGGTCTACAA GCGCTTTGTT GAAGTTGCCG ACAAAAAAAA AGAGGTCTAT
GACGATGACC TGAGAGTGCT GATGGGCGAT GAACGGAGCA AGCCGAAAAA CGCTTATGAG
CTCGATTACC TCCACATCAA CAGCGGTACA GCCTCAATTC CGACCGCAAC CATCAGGATC
CGGCACAAAG AGCAGATCTT TGAAGAATCC GCAATCGGCG ACGGCCCGGT AGATGCCTGC
TTCAGAGCCA TTGAGCGTGC CCTTGGCATC GAATCGATGG TTACCTCCTA CTCCGTCCGC
TCCACCACTG CCGGACGTCA GGCACTCGGA GAGGCGCTTG TCCGCATCCG GGACAAGAAT
GTCTCCTTTA ACGGAAGAGG GGTCTCGACC GATATCATAG AGGCCAGCGC CAAAGCCTAT
CTGCAGGCTC TCGGCCTGCG CCAGCATCAT TTTGACAACA TCACTACAGA AACCATAGAA
AGCGGGGTTT AA
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| Protein sequence | MVKEKIIVFD TTLRDGEQSP GASLNVQEKV EIARQLEKLG VDVIEAGFPA SSPLQLEAVQ
RVSAESKAVV AALARAVEKD ITAAWKALQQ ARKPRIHTFI GTSDIHITGK FGSDRYGLSL
QEKRQTVLNM AVNAVTFAKT FTSDIEFSAE DAGRTDQGFL AEIIEAVIAA GATTVNIPDT
TGYTWPSEFG RKIADLRSRV SNIGNAIISV HCHNDLGLAV ANTLSAVEHG ARQVECSMNG
IGERAGNASL EEIVMALKVR SDLHNFYTDI VTEELYNTSR MVSTFTGIII QPNKAIVGDN
AFSHESGIHQ DGMLKNRQTY EVMTPESVGV PQTSIVLGRH SGKHGLSSRL LSLGYNLDDT
ELEAVYKRFV EVADKKKEVY DDDLRVLMGD ERSKPKNAYE LDYLHINSGT ASIPTATIRI
RHKEQIFEES AIGDGPVDAC FRAIERALGI ESMVTSYSVR STTAGRQALG EALVRIRDKN
VSFNGRGVST DIIEASAKAY LQALGLRQHH FDNITTETIE SGV
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