Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2056 |
Symbol | |
ID | 6462833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2147366 |
End bp | 2148280 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728250 |
Product | hypothetical protein |
Protein accession | YP_002018880 |
Protein GI | 194337086 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00031127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTCC GCCCGCTAAC ACATCAACTC TTCGCCATGA AAAGTACACG TTACCTCTGC AGAGCACTCT TCATCATCAC TGCGGTACTC CTGATACCGG TGAAAAAAGG GGCTGCCGAA CCGATCCTGA ACCCGACCAC CAAAACCCTC TTCAAGCCGC TCCTTGCTGA CCCTTCGGAA CCGAAAATTG CCGTTATGCC CTGGCTTGGC GACCGTTATC TGCAGCTCGA TATCGGCGCC TCGGCTGACC TTTACCAGAG CAAAAACAAG AAATTTGCCG CTGGTGTTGA TTTTGCCACC TACTCTCTCC TGCAACGGGG CGACAATTTC AAGTTTCCGG TTGATGCTAT CGATTATCTC TTTGGTGTCA ACGCAAGCTG GAAAAAACCG ATCAGTAATG ATGCGCTTCC TTTTGATGAA TTCAGCGGAA AAGTGAGAAT CAGCCACATT TCGGCCCATT TTGAAGATGG CCACTATGAT GCAGATACGC ACCAATGGAT TCAGCAGAGC GACTGGCTGG GCACCATTCC CTTTACCTAC AGCCGGGAGT TTGTCAATCT CGTTGTAGCG CTCAGTTCAC CAAATCATCG TATCTATGCC GGATACCAGT ACCTCTACCA CACTCTTCCT GACGGTATCA ATCCACACTC TTTCCAGGCT GGTGTTGAAC TTTCCACTCC TGGAAATACC TATCTTGCCG CAGACTTCAA ACTGCTTCCA ATCTGGCAAC CATCGCTTGA GGAGACGAAA GGACACCGGG GAACATGGAA CGTGCAGGCA GGCAGGCGTC TTGATGACAT AGGGCTGAAG AATGTCAGGG TAGCCTGTAA CTATTTTTCA GGCATGAGCC GCCAGGGCAT GTACTTCTAT CGCCCCGAAA GCTTCAGCAC CATAGGAGTC ATTGTCGATC TCTGA
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Protein sequence | MIFRPLTHQL FAMKSTRYLC RALFIITAVL LIPVKKGAAE PILNPTTKTL FKPLLADPSE PKIAVMPWLG DRYLQLDIGA SADLYQSKNK KFAAGVDFAT YSLLQRGDNF KFPVDAIDYL FGVNASWKKP ISNDALPFDE FSGKVRISHI SAHFEDGHYD ADTHQWIQQS DWLGTIPFTY SREFVNLVVA LSSPNHRIYA GYQYLYHTLP DGINPHSFQA GVELSTPGNT YLAADFKLLP IWQPSLEETK GHRGTWNVQA GRRLDDIGLK NVRVACNYFS GMSRQGMYFY RPESFSTIGV IVDL
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