Gene Ppha_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2024 
Symbol 
ID6462910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp2116036 
End bp2116710 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content30% 
IMG OID642728222 
ProductABC transporter related 
Protein accessionYP_002018852 
Protein GI194337058 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTAT CAGTAGAAAA TATAAACAAA TCATTTGGCG AAAGGCGACT TTTTGAAAAT 
CTCTCTTTAT ATCTTGAGAA AGGAAAGATA TATTCTCTAA TGGGTTCAAA TGGTTCGGGC 
AAGACAACTT TATTTAATAT TTTAACTGGG TTTGTAAAAG TTGACAGTGG TAAAATCCAA 
TTCAATAATA ATAGCATAAG TTCTAAATCA CCTACAGAAA TCAATAGGCT TGGTATTGCC 
AGAACATTTC AAGATTTAAG AATAATACAT GGTCTTACGG TTAGGGAAAA TGTACTAATG 
GTGATGGAAA AGAAAATGTT TCATATTGCT ACATTTGAAG AATTTAATAA AGTAAATGAG 
ATTCTTAAAA AGGTCTCTCT TCTTGAATAT GCTGACCATT TGGGTAGTAA CTTGTCTTTT 
GGTCAGCAAA AACTTCTAAC CTTGGGTTGT TGTCTTGCCA ATAAACCAGT ACTTCTGCTT 
CTAGATGAGC CAATTGCAGG CATCGACAAG GATAATAAAA AGATTATTAA AGATATCATT 
TTAAAACTTA AGAATGAAGA GATAACCATA CTTCAAATAG AACACGATAT GGAATTTATT 
GAAGAAACAA GCGATTTGGT TTTTCAATTA GAAGATAAGG GATTAAAAAT ATTGGAAATA 
AACAATAATT GTTAA
 
Protein sequence
MILSVENINK SFGERRLFEN LSLYLEKGKI YSLMGSNGSG KTTLFNILTG FVKVDSGKIQ 
FNNNSISSKS PTEINRLGIA RTFQDLRIIH GLTVRENVLM VMEKKMFHIA TFEEFNKVNE 
ILKKVSLLEY ADHLGSNLSF GQQKLLTLGC CLANKPVLLL LDEPIAGIDK DNKKIIKDII 
LKLKNEEITI LQIEHDMEFI EETSDLVFQL EDKGLKILEI NNNC