| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2020 |
|---|
| Symbol | |
|---|
| ID | 6462921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2112068 |
|---|
| End bp | 2112250 |
|---|
| Gene Length | 183 bp |
|---|
| Protein Length | 60 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 642728218 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018848 |
|---|
| Protein GI | 194337054 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00517023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA AAAATAAAGC GGAAAACCTT ATGGAAGAAA TAAAAAAAAT AATTATCAAA
ACTGAATTTA ATGGCAAAGA CATCAATGCG TTTAAGGAAT CTGTTTATAA GAAAATTGAA
GAGATATTTT CTAAACAGGT CATAATCGAT AAAAAAATAT CTGAAAGTGC AAAGCAGATT
TAA
|
|---|
| Protein sequence | MKQKNKAENL MEEIKKIIIK TEFNGKDINA FKESVYKKIE EIFSKQVIID KKISESAKQI
|
|---|
| |