Gene Ppha_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2000 
Symbol 
ID6462971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2088323 
End bp2089276 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content50% 
IMG OID642728199 
Productcysteine synthase A 
Protein accessionYP_002018829 
Protein GI194337035 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.982832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCA TCGCAAAAAA ACTGACCGAT CTGATCGGTA ACACTCCTCT TCTTGAACTT 
GGAAATTTCA CTCTTGAGCA TCAGGCCCTG GCAACGATTA TTGCCAAACT CGAATACTTC
AATCCCGGCG GCAGTGTCAA GGACCGCATC GGTTTTTCAA TGATTGAAGC TGCTGAAAAA
CAGGGTTTAC TCCATAAAGA GAGCATCATC ATCGAGCCGA CAAGCGGCAA TACCGGTATT
GCACTGGCGT TTATTGCTGC GGCCAAGGGA TATCGGCTCA TCCTCACCAT GCCTGAAACC
ATGAGTATCG AACGCCGAAA CCTGCTCAAG GCGCTTGGCG CCGAACTGGT ACTGACACCT
GGTACGGAAG GAATGGGCGG AGCAATCAGG AAAGCAGAGG CATTGAGTGC TGAATATCCG
AACTCATTTG TTCCACAGCA GTTCAAAAAC CCTGCAAATC CGGAGATCCA CCGCAAAACA
ACGGCCGAAG AGATCTGGAA CGATACCGAC GGGAACGTTG ATATTTTTGT CAGCGGCGTA
GGCACCGGAG GCACCATTAC CGGTGTAGGA GAGGTACTCA AACAGCGGAA CCCCGAGGTA
AAAATTGTCG CTGTTGAACC CTTCGATTCA CAGGTTCTTG CTGGCAATAA ACCCGGTCCG
CACAAAATAC AGGGAATCGG CGCGGGCTTT GTACCTGCTA TCCTGAACAC TGCCATTTAC
GATGAAATTA TCCCGGTAAA AAACGAAGAT GCCCTGCGTA CGGGTCGCAA ACTGGCAAAA
ACCGAGGGAC TTATTGTTGG TATCTCGTCA GGTGCAGCGG TTTATGCCGC CCTGCAGCTT
GCACTTCGTG AGGAAAACAG AGGAAAACGT ATTGTCGTCA TTCTGCCGGA TACCGGAGAG
CGCTACCTCT CAACACTGCT CTATCAGTTT GAAGAAGAGC CCATTACTAT CTGA
 
Protein sequence
MERIAKKLTD LIGNTPLLEL GNFTLEHQAL ATIIAKLEYF NPGGSVKDRI GFSMIEAAEK 
QGLLHKESII IEPTSGNTGI ALAFIAAAKG YRLILTMPET MSIERRNLLK ALGAELVLTP
GTEGMGGAIR KAEALSAEYP NSFVPQQFKN PANPEIHRKT TAEEIWNDTD GNVDIFVSGV
GTGGTITGVG EVLKQRNPEV KIVAVEPFDS QVLAGNKPGP HKIQGIGAGF VPAILNTAIY
DEIIPVKNED ALRTGRKLAK TEGLIVGISS GAAVYAALQL ALREENRGKR IVVILPDTGE
RYLSTLLYQF EEEPITI