| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1988 |
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| Symbol | |
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| ID | 6462996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2074257 |
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| End bp | 2075252 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728187 |
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| Product | ABC transporter related |
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| Protein accession | YP_002018817 |
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| Protein GI | 194337023 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAA TACTTGAAAA GAAAATCGGG CACTTGACTG CTGAATTTCC TCCACTCACC
GGATTTTTCA GTGATTACGG CATCACCTTC AACGATCTCC ATGCAACACT TGGAGATTCA
CTTGACCTTT TATCGGAAGA GATCTATGAA GATATGGGGA TTGATCGTGA GAAACTGCTT
GAAAATCTCG ATGGCTTTTT ACAGCGCATT GCCCTTGCCG AAATCGACGA AAGGCCCCTG
GTGTCAGATA TTACCATACT CGGTGGTCAC GATAAAAGCG GAACGCCTGA AGAGGTCGAG
CTGACACTTG TGCGTGGCTC CATTACAAGT ATTGTGGGGC CAACCGGATC CGGGAAAAGT
CGTCTGCTTG CCGATATTGA GTGGATGGCG CAGAACGATA CACCAACGGG CAGAACGATA
CGGGTTAATG GCAAAAAACC TGATCCTGAA CTTCGCTTTT CCCTTGAGTA TAAGCTTGTC
GCTCAGTTGT CGCAGAATAT GAACTTTGTG ATGGACGCCA CCGTAGCCGA GTTTGTTTTC
ATGCATGCTG AAAGCCGGAT GATCAACACG CTCGATACTC TTGTCGCCGA TATTATTGCG
CAAGCCAATC TTCTTGCCGG TGAGCCGTTT ACAGCGCAAA CACCCCTGAC TGCGCTTTCC
GGAGGGCAGT CACGAGCCTT GATGATTGCC GATACTGCTT TTTTAAGCTC TTCACCGGTT
GTGCTGATTG ACGAAATTGA AAACGCCGGT ATCGATCGCA AAAAAGCACT CTCTCTTCTG
GTCAGAAAGG AGAAAATTGT GCTGATGGCA ACCCATGATC CCATTCTTGC CCTGATGGCC
GAGCAGCGTC TTATCATCAA AAATGGCGGA ATTCACAAAA TCATCGAGAC AACAGGCAAG
GAACGAGAGA ATCTTGTCCG ACTTGAAGAG TTTGACAATA AACTCTTGGC ACTTCGCACC
CGTCTGAGAA GTGGTGAGCT TATTGAAGAG TTATAA
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| Protein sequence | MIAILEKKIG HLTAEFPPLT GFFSDYGITF NDLHATLGDS LDLLSEEIYE DMGIDREKLL
ENLDGFLQRI ALAEIDERPL VSDITILGGH DKSGTPEEVE LTLVRGSITS IVGPTGSGKS
RLLADIEWMA QNDTPTGRTI RVNGKKPDPE LRFSLEYKLV AQLSQNMNFV MDATVAEFVF
MHAESRMINT LDTLVADIIA QANLLAGEPF TAQTPLTALS GGQSRALMIA DTAFLSSSPV
VLIDEIENAG IDRKKALSLL VRKEKIVLMA THDPILALMA EQRLIIKNGG IHKIIETTGK
ERENLVRLEE FDNKLLALRT RLRSGELIEE L
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