| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1983 |
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| Symbol | |
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| ID | 6463004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2066985 |
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| End bp | 2069885 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728182 |
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| Product | SNF2-related protein |
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| Protein accession | YP_002018812 |
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| Protein GI | 194337018 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.094528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATACAG AGTATCATGC CAAATATATA GCCTGGGAGC TGACACGCCG TCACTCTTCT
GCTGATCTCT GCAAGTTGAC GGCATCGCTG CAGGATGCCC AGGTTGACTT GAACCCTCAC
CAGATTGATG CTGCTTTATT CGCTTTCAAA TCGCCCTTAT CCAAAGGGGC AATTCTTGCT
GATGAAGTCG GTCTTGGAAA AACGATTGAA GCCGGTATAA TACTTTCCCA GCTTTGGGCT
GAGCGTAAAA GAAAGCTGCT GGTAATCTGT CCGGCAAGTC TGCGCAAGCA GTGGAATCAG
GAACTGGCCG ACAAGTTTTA CCTTCCCTCG GTTATTCTTG AATCGAAATC ATTTAATGCC
GAGAAAAAAA AAGGAAATCG AAACCCCTTT GAGTGCCAGG AAATTGTTAT CTGCTCCTTT
CAGTTTGCAC GTGCCAGGGA AGATCTCCTT GGCTTTGTTC AATGGGATCT GGTCATTATT
GACGAGGCTC ACCGGCTTCG TAATGTCTAT AAGTCGTCCA ACCGCATCGG GCAATCAATA
AAGAACTCAC TTTCCGCCTG CAAAAAAGTG CTTCTGACGG CCACACCGCT GCAGAATTCG
ATTCTGGAGC TGTACGGCAT GGTCAGCATC ATTGACGACT ACGCTTTCGG TGACCTGAAA
AGCTTCAAGA GCCGCTACTC CCGCATCCTC GAAGATGGTA ATTTCAATGA GCTGAAAGAG
CGCCTGAAGC CGCTTTGTAA GCGAACGCTG AGGCGCCAAG TGCTTGAATA TGTCAAATAC
ACCAACCGCC TCGCCATTGT TCAGGAGTAC TATCCCTACA AGGAGGAGCA GGAGCTTTAC
GATCTCGTTT CCAACTATCT GATCAAGCCC GACCTGTACG CCCTGCCGGT CAGTCAGCGC
AAGCTCATGA CGCTGATACT CCGAAAACTG CTTGCCTCGT CAACCTTTGC CATTCAGGGT
ACCCTTGAAG GACTTGCCGC AAAGCTTGAC GCCCTGCTTG ACCGGCAGGC ACCGAACAGT
GATAATGAGA CCATTTCCCT CGACTTCGAG ACCTTTGACG AATTGCGTGA AGAGTGGCAG
GAAAACGGCG AACCTCCTCT TGATGAAGCT GAAGAACCTC TCACGCAGGA AGAGCGGAAA
GCGGTACTTG CTGAACGGAA CGAACTGAGG GAGTTCGCCC GACTTGCCAG AATCATTCAG
AAAAACTCGA AAGGTGACAA GCTGGTAACC GCCCTGAGCG GCGGATTCAG GAAACTGCAG
GAGCTCGGAG CGCCAGAAAA AGCCATTATT TTTACCGAAT CAACCCGTAC ACAGCTCTAC
CTGAAAAAAA ATCTCGAACT GCAGGGAGTT GGCGGCAAGA TCGTGCTCTT CAACGGTTCA
AATAACGATC CGGAATCGAG AAAAATTTAC AAGGCATGGA TTGAGCAGCA TAAAGGTACC
GACCGGGTAA GCGGTTCGCC TACGGCCGAT ATGCGTCAGG CTCTGGTAGA TTATTTCCGG
CACGAAGCAA CCATCATGAT TGCTACAGAA GCTGCTGCCG AAGGGATCAA CCTGCAGTTC
TGCTCGCTGG TGGTCAACTA CGATATGCCC TGGAATCCTC AGCGTATCGA GCAGCGCATT
GGCCGCTGCC ATCGCTACGG TCAGCGCTTT GATGTCGTTG TCGTCAACTT TCTGAACATG
GCCAATGAAG CCGATAACAG GGTTTTTCAG TTGCTCGACC AGAAATTCCG GCTCTTCAGC
GGCGTATTCG GAGCCAGCGA TGAGGTACTT GGTAGCATAG AGGGCGGCGT TGATTTCGAA
AAACGGATTG CCGCTATCTA TCAGGAATGT CGCAGGTCTG AAGAGATACA GGAGGCTTTT
GACCGACTGC AGGAGGAGCT TGAACACAAT ATCGAGGAAC GGTTCGAAAA TACCCGTCAG
AACCTGCTGG AAAACTTTGA TGAAGAGGTT CACCAGAAGC TCCGCTTCAG CCTTGAAACA
GGACGGCACT ACCTCAACCA GTATGAGCAG TGGCTCTGGC AGATCACCCG GTACTTCCTG
CGCGACTGTG CGGCATTCGA TCAATCCGAT AATGCCTTCA GGCTGCATAG CAATCCATTT
CCCGGCGAAC AGATACACCC CGGACCCTAT CTGCTGCTGC GAACGGCGGC CAACAGAAAA
AAGTCTGAAA TAGAAGTAGA GGACGATACC AACATCTACC GTGTCGGCCA TCCGCTTGCC
CGCCGGATTA TTGAAACATG CAAAAAGCAA CCACTTGAGC CGAGAGAGCT GCTCTTCGAC
TATTCCGGCA CCCCCAAACA GATCACTCTT CTTGAGCCCT TCGTTGGAAA GAGCGGATGG
CTCCAGCTTC GCTGCCTGAC CATCTCCTCT TTTGAAACCG AGGACTTTCT GCTGCATACC
GGATTTACCG AAACAGGCGA ACTGCTCGAC CACGACCTCT GCCGTAAATT TTTCTCACTC
GACGCAACAG TGGGAAAAAC TCTTGTGCTC CCGGAGGAAG TTGGAGAGCG GTTTACAATC
ATGAATAAAG AGGCTGCCGA AGTAATCCTC AAGGAAAACA ACACCCGAAA CGCGCAGTTT
TTTGATGATG AATACGAAAA GCTCGACAAA TGGGCTGAAG ACATGAAGCT CAGCCTTGAG
CGCGAGATTA AAGACCTTGA TGCGGAAATC AGGCTCCGCA AGGCTGAAGC CAGAAAGCTC
TCCGATCTTG AAAGCAAGGT AAAGGAGCGT CGCAACGTAA AAGAACTTGA AAAGCAGCGC
GACGAAAAAC GGCGCCACCT TTTTGAGGCG CAGGATCAGA TTGAAGGCAA AAAAGATCTA
TTATTAGAGG ATGTAGAAGC GAGAATGAAA CAACAGGTAA GCCAAAACAT TCTGTTTTCA
ATTCGATGGG AATTACAATA A
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| Protein sequence | MNTEYHAKYI AWELTRRHSS ADLCKLTASL QDAQVDLNPH QIDAALFAFK SPLSKGAILA
DEVGLGKTIE AGIILSQLWA ERKRKLLVIC PASLRKQWNQ ELADKFYLPS VILESKSFNA
EKKKGNRNPF ECQEIVICSF QFARAREDLL GFVQWDLVII DEAHRLRNVY KSSNRIGQSI
KNSLSACKKV LLTATPLQNS ILELYGMVSI IDDYAFGDLK SFKSRYSRIL EDGNFNELKE
RLKPLCKRTL RRQVLEYVKY TNRLAIVQEY YPYKEEQELY DLVSNYLIKP DLYALPVSQR
KLMTLILRKL LASSTFAIQG TLEGLAAKLD ALLDRQAPNS DNETISLDFE TFDELREEWQ
ENGEPPLDEA EEPLTQEERK AVLAERNELR EFARLARIIQ KNSKGDKLVT ALSGGFRKLQ
ELGAPEKAII FTESTRTQLY LKKNLELQGV GGKIVLFNGS NNDPESRKIY KAWIEQHKGT
DRVSGSPTAD MRQALVDYFR HEATIMIATE AAAEGINLQF CSLVVNYDMP WNPQRIEQRI
GRCHRYGQRF DVVVVNFLNM ANEADNRVFQ LLDQKFRLFS GVFGASDEVL GSIEGGVDFE
KRIAAIYQEC RRSEEIQEAF DRLQEELEHN IEERFENTRQ NLLENFDEEV HQKLRFSLET
GRHYLNQYEQ WLWQITRYFL RDCAAFDQSD NAFRLHSNPF PGEQIHPGPY LLLRTAANRK
KSEIEVEDDT NIYRVGHPLA RRIIETCKKQ PLEPRELLFD YSGTPKQITL LEPFVGKSGW
LQLRCLTISS FETEDFLLHT GFTETGELLD HDLCRKFFSL DATVGKTLVL PEEVGERFTI
MNKEAAEVIL KENNTRNAQF FDDEYEKLDK WAEDMKLSLE REIKDLDAEI RLRKAEARKL
SDLESKVKER RNVKELEKQR DEKRRHLFEA QDQIEGKKDL LLEDVEARMK QQVSQNILFS
IRWELQ
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