12 homologs were found in PanDaTox collection
for query gene Ppha_1936 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_1936  hypothetical protein  100 
 
 
116 aa  223  7e-58  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4702  hypothetical protein  43.42 
 
 
74 aa  57.8  0.00000005  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.127009 
 
 
-
 
NC_011757  Mchl_5168  hypothetical protein  45.21 
 
 
74 aa  56.6  0.0000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.672058  normal  0.205923 
 
 
-
 
NC_010338  Caul_0779  hypothetical protein  59.57 
 
 
100 aa  54.7  0.0000004  Caulobacter sp. K31  Bacteria  normal  0.153634  normal  0.206875 
 
 
-
 
NC_008639  Cpha266_1921  hypothetical protein  43.75 
 
 
118 aa  53.1  0.000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0276  hypothetical protein  40 
 
 
217 aa  48.1  0.00004  Conexibacter woesei DSM 14684  Bacteria  normal  0.551611  normal 
 
 
-
 
NC_010831  Cphamn1_1749  hypothetical protein  36.99 
 
 
82 aa  45.8  0.0002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3078  hypothetical protein  41.67 
 
 
98 aa  44.3  0.0006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2196  hypothetical protein  51.02 
 
 
78 aa  43.9  0.0007  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1661  hypothetical protein  51.02 
 
 
127 aa  43.9  0.0008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0575634  n/a   
 
 
-
 
NC_011891  A2cp1_2285  hypothetical protein  51.02 
 
 
78 aa  43.5  0.0009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3493  hypothetical protein  55.81 
 
 
75 aa  43.1  0.001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.78646 
 
 
-
 
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