| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1832 |
|---|
| Symbol | |
|---|
| ID | 6463415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1935070 |
|---|
| End bp | 1936503 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642728046 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018680 |
|---|
| Protein GI | 194336886 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.119434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGTG AAATAACAAA AACAGAGTTC AGCGAGGAGG ATTTCCGGCA GTTTCACCAG
AATCTGAGAA AGGAAACACG GATTCTGATG GATTGGTTTT CCTCGGATCT CTTCGATAAT
CACCAGGAGA TGTGCGGCTT CGAACTCGAA GCATGGCTCA TCGATCAGCA TTGCGCTCCG
ACTGCCAGAA ACGAGGAGTT CCTCCAGCGG GTCAACAATC CCCTGGTTGT GCCTGAGCTC
TCAAAATATA ATTTCGAACT CAATATTGCA CCGCATCCTC TGGATTGCCA TCTCCCGGAA
TTTCTGAAAA ATGAACTACA GAAGCTCTGG AATATCTGCA CCATCAATGC CCTTGACATG
GGGTGCAATA CCCTTCTGAC CGGTATTCTG CCGACCCTGC AAGACAGGAT GCTGACGCTT
GAGAACATCT CATCGCTGAA ACGGTTTCAC GCGCTGAACC ACGAAATTCT GCGATCGATA
TCTCGTCACT CGCTTAAAAT TCACATAGAG GGAGAGAAGG AGTCGCTGGA TATCGTCCAT
CATGATGTCA TGGCCGAGGC GGCAACGACA TCACTGCAGA TACACTTTCA GGTTCCCGTC
AGCAAGGCGG CGGCTGTTTA CAACATCGCC CATATACTGT CGGCGCCGAT GGTCGCACTC
ACAGCCAATT CCCCGTTCCT CTTCGGCAAG GAACTCTGGG ATGAGACACG CATTCCCCTG
TTCGAACAGG CTGTAAAAAC CCCTGCATTT GTTGATCTCT CCGGAAGAGT GGTTTCGCGC
GTCACATTCG GACGGGATTA CGTCCGTGAT TCACTCAAAG AGGTTTTCCT CGAAAATCTC
GACGGATTTC CGGCGCTCCT GCCGATCACT TTCGATCAGG ATTTCAGCCT GCTGAACCAT
CTGCGGCTGC ACAACGGAAC CATCTGGCGC TGGAACCGCC CTCTGATAGG ATTCGGTGAG
GATGGTCGCC CTCATGTGCG GATCGAACAT CGCGTACCAC CGGCAGGACC TTCGATTCCG
GACATCGTAG CCAATATCCT CTTTTTTTAT GGCGCGACAC TTCACCTGCA GCCCGAAGTT
CCGCAGGCTG AGATATCGTT CGAACATGCT CGCTCAAACT TTTACGCCGC CTCACGCTTC
GGGCTTGACG CCAGGGTCAC CTGGAGTTCG GGAAACGCCA TGCCCGTGGA TACTCTTCTG
CTGCAACAGT TGATCCCCGG AGCCATTCAG GCTCTTGCCG AACGAGGAAT CGACAGTCAT
GAGCTGAAAT ACTACCTTGT CGATATTCTT GCAAGACGCG TAGCGACGCG ACGGAACGGC
GCCTGGTGGC AAAAAACCTT CATCCGGCGT CACGGCCCCG ATTTCAGGGC GATGACCCAG
GCATACCTCG AAAACCAGAG AAAAAACATT CCTGTACACG AATGGAGCAT CTGA
|
|---|
| Protein sequence | MGSEITKTEF SEEDFRQFHQ NLRKETRILM DWFSSDLFDN HQEMCGFELE AWLIDQHCAP
TARNEEFLQR VNNPLVVPEL SKYNFELNIA PHPLDCHLPE FLKNELQKLW NICTINALDM
GCNTLLTGIL PTLQDRMLTL ENISSLKRFH ALNHEILRSI SRHSLKIHIE GEKESLDIVH
HDVMAEAATT SLQIHFQVPV SKAAAVYNIA HILSAPMVAL TANSPFLFGK ELWDETRIPL
FEQAVKTPAF VDLSGRVVSR VTFGRDYVRD SLKEVFLENL DGFPALLPIT FDQDFSLLNH
LRLHNGTIWR WNRPLIGFGE DGRPHVRIEH RVPPAGPSIP DIVANILFFY GATLHLQPEV
PQAEISFEHA RSNFYAASRF GLDARVTWSS GNAMPVDTLL LQQLIPGAIQ ALAERGIDSH
ELKYYLVDIL ARRVATRRNG AWWQKTFIRR HGPDFRAMTQ AYLENQRKNI PVHEWSI
|
|---|
| |