| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1825 |
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| Symbol | |
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| ID | 6463426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1926795 |
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| End bp | 1929344 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642728039 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002018673 |
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| Protein GI | 194336879 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.101601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAA AGTTACTCCG GTTAGAGCAG GAAAATGCCC GATTGAAAGC GCTCCTGAAA
GAGAGAGAGG AAGAGAAGCG GATTACTTCT CTTCGAACGG GTGAGTGTCT GAGTGAAAGC
GAGGAAAAGT TCAGGATACT CTTCGACGAA CATTCAGCCG TGATGCTGGT TATTGATCCT
GATACGGCTA ACATCGTCGA TGCCAATCGT GCAGCCGCCA GCTTTTATGG CTGGTCGATT
GAGGAGCTCA GGAAGATGAA TATTCAGCAG ATCAATCTTC TTTCACCGGA TGTTGTGCTG
AAAGAGATGG AAAAAACCCG TTCATCGAAG CAAAACCGAT TTGTTTTTTG CCACCGCCTT
TTTGACGGCT CTGTGCGGGA TGTGGAGGTG TTCAGTAACC GAATTGAGAT TGGGGGCAAA
GCGTTTCTCT ATTCAGTCAT TCATGATATC ACTGAACGCA ATCAGGCTGA GCAGGAGTTG
CGCATCAGTG AAGAGCGTTT CAGGAAGCTG TTTGAAAGTC ATGCAGCGGT CAAGATTCTT
CTCGATCCTG ATACGGGCAA TATTGTTGAC GCCAATCGTG CGGCAGCAGA CTTTTATGGG
TGGTCTGTTG AGGAACTAAG GAAGATGAAT ATCAGGCAAA TCAATCCGAT CACTGTTGAA
GAGATCCAGA ATAATCTTGA TAAAAGCCGT TCAGCAAAGC AAAACCGCTT TTTCTTTCGT
CATTGCCGTT CGGATGGCTC TGTGCGTGAT GTGGAGGTCT TCTCGAGCAA GATAGAGATT
ACGGGAAAGG AATTTCTTTA TGCTATTGTT TTTGATATCA CCGAGAGCAA AAAGACCGAA
AAACTATTGA GTGACAGTGA ACTGAAGTTT CGTACGATTA CGGAACAGAT GGTTGAGGTG
GTTTTTGTTT CTGACAGGAG CGGAATTCTG ACCTATGCCT CACAGGCTAT TGAAAAGATT
TTTGGCTATA CCCCCCAGGA GGTTATCGGG GATCACTTTA CCGAGTATCT TGCTGAAGAT
GAAATTCCGG GAGCGCTTCT CATATTCAAT AAAACCTTGC AGGATGACTT GATCGATCAG
GTTGTAGAGT TCAGGTTCAG GAAAAAGAAC GGAGATTTTT TTTACGGGGA AGTTCATGTT
CACTATTTTC AGGGGCAGGA TTTATCGGGC ATGATGGGGC TGATCCGTGA TGTTACAGAG
CGCAAAAAGA ATGAAAACAG GCGTAAACAG TACGAGCAGG AGCTGCTTGA AAACGGGCTG
TTGCTCAAAA GTATCTATGA GGAGGTCAAT CATTCCATTT TTGTTGTTGA CGTCCTTCCA
GATGGTTCCT ATCAGTATAA AGGCCATAAT CCGCTTAATG AACAACTGAC AGGAATAAGC
AATCAGGAGC TTGTTGGAGC AACACCCGAA AAGCTTTTTC CTCCTCAAAT TGCTCAAAAG
TTTATCGGTA ACTACGATGC CTGTGTGCGT CGAGGCAGTT CCATACATTT TGAAGAGAAT
TTGCAATTCA TGGGTAAGGT GAGCTGGTGG GAGACGGTTC TTAATCCGGT TCGCAATGAT
TATGGTCGTA TTTACCGGAT TATCGGTACC AGTACCAAAA TTACTGCACG CAAGCTGGCT
GAACAAAAAC TGTTTCATCT TAACAAGACA CTCGAAGAGC GTATTGCAGA ACGTACCCGA
GAGCTTGAAA TAATGCATCA GCAGGTGATT CTGCATGAAA AACTTGCCTC GATTGGTCAG
CTTGCTGCCG GTATTGCCCA TGAGCTGAAT AATCCGCTCA ATTTTATCAA GATCAACTTT
TCGACCCAGA AGGAATATTT TGACGATCTC TTGTTGCTTG TAAACGAGTA CCGGGAGATT
ACAGGAAAAG TGGAGTCGAT GGGTGGATTT TTGGCTCCCG CGTTGCAAAA GCTACGCAGA
ATGGAGGCGG AGCTTGACAT TGATATGCTG CTTGATGATA TTCCGATGAT CTTTTCCGAG
TCAAATAATG GTTTCGAGCG TATGACAACC ATTATCAACA GCATGAGGAA TTTCTCCATA
ACTCACGCTC CTGATGAGCG GGTCTCGTTC GATCTCAATC AGGGACTCCG TGATATGCTT
ATTCTTGCCC GTCATGAATA TCGTGACATT GCCGGGATTG AAACCAGGTT TGATGAAGTG
CTTCCTTCGG TATACTGTAA TCCGGAACAG ATTAATCAGC TCTTTCTCAA CATGATTGTC
AATAGTGCAC ATGCAATCAA GTCACAGAAT CGGAGTTCTC CCGGCACAAT CGCGCTTCAT
ACCTGGTTCG AGGGCAGCAA GGTCTTCTGC TCAATTACCG ATGACGGGCC AGGCATACCG
GAGGAAATCA GGAGAGATAT TTTTAATCCG TTTTTCAGTA CAAAAGAACC TGGAAAAGGT
ATCGGACTCG GGTTAAGCAT TTGTTATGAC ATTGTTGTCC ATAAACATGG TGGAACTCTT
TCTGTTGAGT GTCCTGCTGG GGGAGGTACG ATTATTACCA TAGGGTTGCC TTCAAGGATC
TGTCCAGTTG CCGGTTTTCA GCCAGAGTAG
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| Protein sequence | MEKKLLRLEQ ENARLKALLK EREEEKRITS LRTGECLSES EEKFRILFDE HSAVMLVIDP
DTANIVDANR AAASFYGWSI EELRKMNIQQ INLLSPDVVL KEMEKTRSSK QNRFVFCHRL
FDGSVRDVEV FSNRIEIGGK AFLYSVIHDI TERNQAEQEL RISEERFRKL FESHAAVKIL
LDPDTGNIVD ANRAAADFYG WSVEELRKMN IRQINPITVE EIQNNLDKSR SAKQNRFFFR
HCRSDGSVRD VEVFSSKIEI TGKEFLYAIV FDITESKKTE KLLSDSELKF RTITEQMVEV
VFVSDRSGIL TYASQAIEKI FGYTPQEVIG DHFTEYLAED EIPGALLIFN KTLQDDLIDQ
VVEFRFRKKN GDFFYGEVHV HYFQGQDLSG MMGLIRDVTE RKKNENRRKQ YEQELLENGL
LLKSIYEEVN HSIFVVDVLP DGSYQYKGHN PLNEQLTGIS NQELVGATPE KLFPPQIAQK
FIGNYDACVR RGSSIHFEEN LQFMGKVSWW ETVLNPVRND YGRIYRIIGT STKITARKLA
EQKLFHLNKT LEERIAERTR ELEIMHQQVI LHEKLASIGQ LAAGIAHELN NPLNFIKINF
STQKEYFDDL LLLVNEYREI TGKVESMGGF LAPALQKLRR MEAELDIDML LDDIPMIFSE
SNNGFERMTT IINSMRNFSI THAPDERVSF DLNQGLRDML ILARHEYRDI AGIETRFDEV
LPSVYCNPEQ INQLFLNMIV NSAHAIKSQN RSSPGTIALH TWFEGSKVFC SITDDGPGIP
EEIRRDIFNP FFSTKEPGKG IGLGLSICYD IVVHKHGGTL SVECPAGGGT IITIGLPSRI
CPVAGFQPE
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