| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1804 |
|---|
| Symbol | |
|---|
| ID | 6461677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1910488 |
|---|
| End bp | 1911288 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642728019 |
|---|
| Product | Gas vesicle synthesis GvpLGvpF |
|---|
| Protein accession | YP_002018653 |
|---|
| Protein GI | 194336859 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.315624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCTA TTCAAGAAAG ACTTATATAC ATCTTTTGTG TTACAAGTGA GCCCCCTTTA
TTACAACAGT ATCAATTGCA GAAGGGAATA TGCGTAGTAG ATGTTGATGG ATTATTTGTT
ACTACAATGG ATGTGACAGA TAATGATTTT GCGGAAAATC AATTACAATC AAATCTATCT
GATGTTGTCT GGTTAGATAC AAAGGTAAGG GAACACCTTG ATGTTATTAC TTCCATTATG
CAACATGTCA AGAGCCTGAT TCCCTTCAAT TTCGGCACTC TGTACAAATC TGAAAGCAGT
TTGATGCAGT TTATAATCAA ATATGCTGAA GAGTTTAAAA AAAATTTGGT TTATCTCGAA
GAGAAAGAGG AGTGGGCTGT AAAGCTCTAT TGCAATAAAA ATAAGATTGT AGAGAATATC
ACGCATCTCA GTAAAAAAGT ATCAGATATA AATGCTTTGA TCCAAAATAG TTCAATAGGA
AAAGCATATA TACTTGGAAA GAAAAAAAAT GAAATCATCG AGAACGAGAT TATTAATATA
TATAATACGT ACTCAAAAAA AATATTTACA AAGTTTAGTA TCTTATCTGA AGAATTCCGT
TTCAATCCAA TTCCAAACAA TGAAACTTTG GAAAAAGAGG ATGATATGAT ACTTAACGTG
GTTTTGTTAT TGAATAAAGC AAATGTTGAA AGTTTTATTG AAACGTCTGA TCAGTTAATT
ATTCAGCATC AAAATATAGG CCTGAATATT GAAATTACAG GCCCTTGGCC TTGTTATTCC
TTTATAAATA TATCGCATTG A
|
|---|
| Protein sequence | MVAIQERLIY IFCVTSEPPL LQQYQLQKGI CVVDVDGLFV TTMDVTDNDF AENQLQSNLS
DVVWLDTKVR EHLDVITSIM QHVKSLIPFN FGTLYKSESS LMQFIIKYAE EFKKNLVYLE
EKEEWAVKLY CNKNKIVENI THLSKKVSDI NALIQNSSIG KAYILGKKKN EIIENEIINI
YNTYSKKIFT KFSILSEEFR FNPIPNNETL EKEDDMILNV VLLLNKANVE SFIETSDQLI
IQHQNIGLNI EITGPWPCYS FINISH
|
|---|
| |