| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1557 |
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| Symbol | |
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| ID | 6463376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1645287 |
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| End bp | 1646594 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727783 |
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| Product | HipA domain protein |
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| Protein accession | YP_002018423 |
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| Protein GI | 194336629 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG CGATACAGCG AAGTGCAACG GTTTGCCTTG GTGAAGGCGG GATGGTTGTT
GGCCAACTTG CCTATGCTCG TAGTGGTATG CGTGAAAACT CTTCGTTTGC CTATAGCCGA
CAGTGGCTTC AGTCGATTGA GCGCTTTTCA ATCTCCCCTG ACCTTCTATT GATTGAAACA
CATCAGTACC ATAAGGCAGC TTCCGCAAAT GACTCCGTTT TTCATTTTGC AATTGCCGAT
ACGGCGCCTG ATGGTTGGGG TTGCCGTGTC ATTGCGCGTG ATCATGCAAA GCGTCGTAAC
GTGCAGATGC TGCATGGCGC TGAGCAGCCA TTTGCTCCTC TTACGGAATG GGACTATCTG
GTCGGTGTGG ATGATTTCAG TAGGGTTGGC GCTCTGCGTT TGCGCGATGA AACCGGGAAC
TATCTGAGAA CCATTGAGAG TGGCGACAGG GCAACGCCAC CCTTGCTGGA GCTGGCACAT
TTGCTTGGTG CAAGCCATGC TGTTGAGCGG GGGAGTGATA CGGAAGCAGA CCTTCGTTAC
CTCCGTGGCA GGGGAACCTC ACTCGGCGGG CTTCGTCCGA AATGCTCTGT CATTGATGAC
AATGGGCAGT TGGCCATCGG CAAGTTCTCA AGCGTCAAGG ATCAGCGCAG TGTGACCAAA
GGTGAAGTTT TGGCCTTGCG CCTTGCTTTG GTTGCCGGTA TTGATGCCGC CCAGGCTCGT
ATTGTTTATG CTGACAAAGC TCCAGTGGCT GTCGTGCGTC GTTTTGATCG TACGCTTCAG
GGTGGTCGTA TTCCCTATTT GTCGGCAGCC TCTCTCCTTC AGCTCCGCCG TGATGATGAT
TCTTCATACA GCGAGATAGC CGAGCGTATT ATCGCTACCT GTGCAGACCC AAAACATGAT
CTGGCAGAGC TGTGGCGTCG AATTGTCTTT AATCTGTTGA TTACCAATGT GGATGACCAT
CTGCACAATC ATGGCTTTCT GCACGTCGGT CACGGTCAGT GGCGGCTTGC GCCAGCCTTC
GATCTCAATC CTTTCCCCGA CAAGGATCAG GAACTCAAAA CATGGTTGAC GGAGGATACG
GGGCCTGTAT CCTCCATTAA AGATGTGTTG CTTGTTGCTG CTCAGTTTTG GCTCGAAAGA
GAGCGTGCGC TCGAAATCCT GCGGCAGGTC TACACTGCTG TAGAGAACTG GCGAGTTGTG
GCTTTAACTG CGACGGTTGG CATGGAACCG CATGACCTGG TCGATTTTGC GCCAGCTTTT
GAGCATGCAC AGATGAAGCT GGCGGCCACA CTTCTCAGGC AGGGTTGA
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| Protein sequence | MSKAIQRSAT VCLGEGGMVV GQLAYARSGM RENSSFAYSR QWLQSIERFS ISPDLLLIET
HQYHKAASAN DSVFHFAIAD TAPDGWGCRV IARDHAKRRN VQMLHGAEQP FAPLTEWDYL
VGVDDFSRVG ALRLRDETGN YLRTIESGDR ATPPLLELAH LLGASHAVER GSDTEADLRY
LRGRGTSLGG LRPKCSVIDD NGQLAIGKFS SVKDQRSVTK GEVLALRLAL VAGIDAAQAR
IVYADKAPVA VVRRFDRTLQ GGRIPYLSAA SLLQLRRDDD SSYSEIAERI IATCADPKHD
LAELWRRIVF NLLITNVDDH LHNHGFLHVG HGQWRLAPAF DLNPFPDKDQ ELKTWLTEDT
GPVSSIKDVL LVAAQFWLER ERALEILRQV YTAVENWRVV ALTATVGMEP HDLVDFAPAF
EHAQMKLAAT LLRQG
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