7 homologs were found in PanDaTox collection
for query gene Ppha_1540 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_1540  hypothetical protein  100 
 
 
285 aa  583  1.0000000000000001e-165  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.014693  n/a   
 
 
-
 
NC_007514  Cag_0800  hypothetical protein  54.3 
 
 
279 aa  305  5.0000000000000004e-82  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0982  hypothetical protein  50.18 
 
 
279 aa  303  2.0000000000000002e-81  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0924499  n/a   
 
 
-
 
NC_011059  Paes_1196  hypothetical protein  50.36 
 
 
284 aa  303  3.0000000000000004e-81  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0509625 
 
 
-
 
NC_010803  Clim_1097  hypothetical protein  53.56 
 
 
286 aa  293  3e-78  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000249138  n/a   
 
 
-
 
NC_007512  Plut_1225  hypothetical protein  51.66 
 
 
286 aa  290  2e-77  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.889196 
 
 
-
 
NC_010831  Cphamn1_1463  hypothetical protein  46.49 
 
 
274 aa  274  1.0000000000000001e-72  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.476782  normal 
 
 
-
 
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