Gene Ppha_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1540 
Symbol 
ID6463413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1622191 
End bp1623048 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content47% 
IMG OID642727766 
Producthypothetical protein 
Protein accessionYP_002018406 
Protein GI194336612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.014693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGAA GGGGAGTACT CTTGTTGGTA TTGTTTATGC TTGTTCTGGG TGGTGGCTGT 
GCCGATTTCA GAACGGTTGG CAGGCAGGAG ATGCCTGTTG AGGAGACTGC GCTGATTGCT
GAACATACGG CGCTTTATCG GGAAGTTGCA GAGGCATCGC CATTTATTCA TTCGCTTGAT
GGTTATGCTG ATGTCTGGAT AAAAACTCCG AAAAGGCAAA ATCGTCTCTT TTGCAATATC
AGAATCAATC GGGGAGGCAA TGCAAGAGTG ATTGCCAGTG CAGGCCTGCT TGGATGGCCT
GTGGCGGATA TGTTTTTTAA TGGTGATTCT CTCTATGTGC ATGACATGCT CAATAATCGT
CTTTTTCAGG GCCGTAACAA TGAGACAAAT CTTGAGAAAA TTCTTGGAGT GAATTCAGGA
TATACTTTGC TGAAGGAGTC TTTGTTGGGG CTTGTGAAAA TTCCGGAGCC GGCAAGTGCT
ATACAATCGG TGAAAAAAGG CTCAGGGTCG CTGCTCTTTA CCCTTGCGAC TCGTAAGGGA
AGCAAGGAGG TGGTCATTGA TCCTCTCAAC AGAACCTTGA CCGCTCTTCT TGTCAAGGAT
CGGAAGGGCA GAACAATAAC GGAGATCCAG TTCAGGAATT TTGAGACCAT TACGATTGAG
GGTCGCAGCA AGCTGGTGCC AAAAGAGATC GGGATGGTGC TTTACAACAG CGGTGCAGAT
GGGCTTGGGG AGCATCAACT GCTGATCTCT TATGATGAAC GGGTATTTAA TCCGGAAAAT
CAGTCGATTC AGTTTCTGAT GCCGAAAAAA GTCAAGGTGG TCAATCTTGA TGATGCGGTG
TTTCTGCCCT GGATGTAA
 
Protein sequence
MKGRGVLLLV LFMLVLGGGC ADFRTVGRQE MPVEETALIA EHTALYREVA EASPFIHSLD 
GYADVWIKTP KRQNRLFCNI RINRGGNARV IASAGLLGWP VADMFFNGDS LYVHDMLNNR
LFQGRNNETN LEKILGVNSG YTLLKESLLG LVKIPEPASA IQSVKKGSGS LLFTLATRKG
SKEVVIDPLN RTLTALLVKD RKGRTITEIQ FRNFETITIE GRSKLVPKEI GMVLYNSGAD
GLGEHQLLIS YDERVFNPEN QSIQFLMPKK VKVVNLDDAV FLPWM