Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1540 |
Symbol | |
ID | 6463413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1622191 |
End bp | 1623048 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727766 |
Product | hypothetical protein |
Protein accession | YP_002018406 |
Protein GI | 194336612 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.014693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGAA GGGGAGTACT CTTGTTGGTA TTGTTTATGC TTGTTCTGGG TGGTGGCTGT GCCGATTTCA GAACGGTTGG CAGGCAGGAG ATGCCTGTTG AGGAGACTGC GCTGATTGCT GAACATACGG CGCTTTATCG GGAAGTTGCA GAGGCATCGC CATTTATTCA TTCGCTTGAT GGTTATGCTG ATGTCTGGAT AAAAACTCCG AAAAGGCAAA ATCGTCTCTT TTGCAATATC AGAATCAATC GGGGAGGCAA TGCAAGAGTG ATTGCCAGTG CAGGCCTGCT TGGATGGCCT GTGGCGGATA TGTTTTTTAA TGGTGATTCT CTCTATGTGC ATGACATGCT CAATAATCGT CTTTTTCAGG GCCGTAACAA TGAGACAAAT CTTGAGAAAA TTCTTGGAGT GAATTCAGGA TATACTTTGC TGAAGGAGTC TTTGTTGGGG CTTGTGAAAA TTCCGGAGCC GGCAAGTGCT ATACAATCGG TGAAAAAAGG CTCAGGGTCG CTGCTCTTTA CCCTTGCGAC TCGTAAGGGA AGCAAGGAGG TGGTCATTGA TCCTCTCAAC AGAACCTTGA CCGCTCTTCT TGTCAAGGAT CGGAAGGGCA GAACAATAAC GGAGATCCAG TTCAGGAATT TTGAGACCAT TACGATTGAG GGTCGCAGCA AGCTGGTGCC AAAAGAGATC GGGATGGTGC TTTACAACAG CGGTGCAGAT GGGCTTGGGG AGCATCAACT GCTGATCTCT TATGATGAAC GGGTATTTAA TCCGGAAAAT CAGTCGATTC AGTTTCTGAT GCCGAAAAAA GTCAAGGTGG TCAATCTTGA TGATGCGGTG TTTCTGCCCT GGATGTAA
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Protein sequence | MKGRGVLLLV LFMLVLGGGC ADFRTVGRQE MPVEETALIA EHTALYREVA EASPFIHSLD GYADVWIKTP KRQNRLFCNI RINRGGNARV IASAGLLGWP VADMFFNGDS LYVHDMLNNR LFQGRNNETN LEKILGVNSG YTLLKESLLG LVKIPEPASA IQSVKKGSGS LLFTLATRKG SKEVVIDPLN RTLTALLVKD RKGRTITEIQ FRNFETITIE GRSKLVPKEI GMVLYNSGAD GLGEHQLLIS YDERVFNPEN QSIQFLMPKK VKVVNLDDAV FLPWM
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