| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1489 |
|---|
| Symbol | rplS |
|---|
| ID | 6463506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1570331 |
|---|
| End bp | 1570693 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642727716 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_002018356 |
|---|
| Protein GI | 194336562 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.448385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGT TAATCAAGTT GGTTGAAGCC ACCCAGGCTG TTACAGATTT TCCGGAAATC
AATCCGGGTG ATACCGTCAA GATTCAGTTG AAGGTTATTG AGGGAGAAAA AGAGCGACTT
CAGGCTTTTG AAGGCGTTGT CATCAGCGAC AGGGGTGCTG GAGGCAACAA GACCATCACT
GTCCGCAAAA TTTCTCATGG TGTTGGTGTT GAAAGGATTA TTCCGGTCAA TTCACCCAAC
ATTGAGAGTG TTACGGTGGT CAAGCATGGC AAGGCAAGAA GAGCAAAACT CTTCTACCTC
CGCAAACGTA CTGGCAAAGC TGCACTGAAA GTCAAGGAAC GCAAGATGGC AGAGAGGGTC
TGA
|
|---|
| Protein sequence | MDQLIKLVEA TQAVTDFPEI NPGDTVKIQL KVIEGEKERL QAFEGVVISD RGAGGNKTIT
VRKISHGVGV ERIIPVNSPN IESVTVVKHG KARRAKLFYL RKRTGKAALK VKERKMAERV
|
|---|
| |