| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1488 |
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| Symbol | |
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| ID | 6463507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1569307 |
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| End bp | 1570143 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727715 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_002018355 |
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| Protein GI | 194336561 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTGA GCTTGAACAG CCGGAATATC GAACGCTTCC GTCAACAAAT TTTTGACTTT
TACCAGTTGA ACAGAAGAAG TTTTCCCTGG AGGGAGACTA CCGATCGTTA TGCAGTCATG
GTCAGCGAAA TCATGTTGCA GCAGACGCAA GCCGACCGGG TTGTGGGAAA ATTTCTGGCC
TGGATGGACA CTTTTCCTGA TACAGAGACT CTTGCTTCTG CAACCCTCAG GGAGGTGCTG
ATACTCTGGA GCGGCCTTGG TTACAACTCA CGCGGCCAGA GGCTTCAGAA CTGTGCAAAG
GTGATCATGG AGCGGTTTGA TGGGGTTGTG CCCGCCCGCC CGGAGCAGCT TATAACCCTT
CCGGGCATAG GGGAGTATAC CTGCCGCTCT ATTCCGGTTT TTGCTGACAA TCTTGATGTT
GCTGCTGTCG ATACCAACAT TCGCCGGATC ATCATTCACG AATTTTCCCT GTCGGAAGAT
ACCCCGAAAC GGGAAATCCA ATCCGTCGCA GAGCTGCTCC TGGCGAAAGG TCGAAGCCGT
GAGTGGCATA ATGCCCTCAT GGATTATGGA TCGATCAATC TTACCAGCCG CAGAACAGGA
ATTCGTTCAT TGACGAAACA GTCGAAATTC CAGGGTTCAA AACGCTGGTA TCGCGGCAGA
CTGCTGAAAG AGCTTGTCGC TTCCGAATCT CTCTTTGTTG AAGAACTTGA AGAAAAATAT
GGCGACTGTC CCTGGGGTTT GCAGGGAATT ATCGACGGAC TCGTTCGTGA AGGGCTTGTT
GATGAGGATG AGGGTTTGAA TGGGCAGGGG AGAGTTCTGA GAATCAGGGA AGAGTAA
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| Protein sequence | MTLSLNSRNI ERFRQQIFDF YQLNRRSFPW RETTDRYAVM VSEIMLQQTQ ADRVVGKFLA
WMDTFPDTET LASATLREVL ILWSGLGYNS RGQRLQNCAK VIMERFDGVV PARPEQLITL
PGIGEYTCRS IPVFADNLDV AAVDTNIRRI IIHEFSLSED TPKREIQSVA ELLLAKGRSR
EWHNALMDYG SINLTSRRTG IRSLTKQSKF QGSKRWYRGR LLKELVASES LFVEELEEKY
GDCPWGLQGI IDGLVREGLV DEDEGLNGQG RVLRIREE
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