Gene Ppha_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1291 
Symbol 
ID6463688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1351391 
End bp1351834 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content42% 
IMG OID642727532 
Producttransposase IS200-family protein 
Protein accessionYP_002018173 
Protein GI194336379 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.254589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT ATATTCACAA GAGCCACAAT GTCACCGTTC TGATGTATCA CATAGTGCTA 
CCAGCAAAGT ATAGACGCGT GATTTTTGAT AATGAGGTGG ATGAAGTCCT AAAAGACGTG
TGCTTGGACA TAGAAAATCG TTATCAGATC AAGTTCCTGG AAATTGGTAC AGATAAAGAT
CATGTGCATT TTTTGGTGCA ATCAGTGCCA ACGTATAGTG TCACGAAAAT CGTGACGATG
ATAAAGAGTA TTTCTGCTCG AGAAGTGTTC AGGCGATGTC CCAAAGTAAA AAAACTGTTG
TGGGGTGGTG AGATGTGGAC GGATGGGTAT TATGCCGGAA CGGTTGGAAA GCATGGAAAT
GAAGACATGA TAGGCAAGTA TGTCAAAGGG CAGGGCGGTA CGTATCAGAA ACGCTACAGT
GATTATCAGT TGTCACTGTT CTAA
 
Protein sequence
MSEYIHKSHN VTVLMYHIVL PAKYRRVIFD NEVDEVLKDV CLDIENRYQI KFLEIGTDKD 
HVHFLVQSVP TYSVTKIVTM IKSISAREVF RRCPKVKKLL WGGEMWTDGY YAGTVGKHGN
EDMIGKYVKG QGGTYQKRYS DYQLSLF