| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1270 |
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| Symbol | |
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| ID | 6463728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1332278 |
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| End bp | 1333084 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727511 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002018152 |
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| Protein GI | 194336358 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTGCA AACAGCAATT TCCCTTTCGT TTCGGGACAA GTTCCTACAT CATTCCTGCT
GATATCATTC CTAATGTTGA GTTTCTCAAG GATAAGGTGG ACGATATTGA GCTGGTACTC
TTTGAGTCGG ATGAATTCAG CAACCTGCCC TCTCCGGGGG ATATGCAGAA GCTGGCGGAA
CTTGCCGAAG CCTCTGCACT GACCTATTCG GTGCACCTGC CGCTTGACGT CTATCTCGGC
CATCCTGACC GCAGTGAGCG GGAACGCTCA GTCGGCAAAT GCCTGAGAAT TATCGAGCTG
ACCCGCGATT TGCCGAAATC AGCCTATGTC ATGCATTTCG AAGCGGGGCC GGGTGTCGAT
ATCAACGCAT TTTCTGCAGA TGAAAAGAGA CTCTTTACGG AGGCACTTCA CGATTCCATT
TCGATGCTTC TGAAGGGTAC CGCTGTTCCG GCATCAGAAT TCTGTGCTGA AAATCTCAAC
TACCCCTTCG AGCTTGTCTG GCCTGTGGTC GAAGCGTTCG GCCTCTCCGT TACGCTCGAT
GTTGGCCATC TTGAGTTCTA CGGCTTTCCA ACCGCAGAGT ATCTTGAGCG TTACCTGCCT
TATGCCAGGG TGCTGCACAT GCATGGCACG CTTGAGGGAA AGGATCACAA CTCTCTCTCC
TTCATGAAGC CTGAAGCGCT TGATCTGGTG ATGAAAGCAC TCACGGATGC GCCTGTACAA
AGCAGGGTTT TTACCCTCGA AATTTTTTCG CAGGAGGATT TTGACTCCTC CTGCAGGGTG
ATGGAGCGGT TTGTACTCTC AGACTGA
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| Protein sequence | MICKQQFPFR FGTSSYIIPA DIIPNVEFLK DKVDDIELVL FESDEFSNLP SPGDMQKLAE
LAEASALTYS VHLPLDVYLG HPDRSERERS VGKCLRIIEL TRDLPKSAYV MHFEAGPGVD
INAFSADEKR LFTEALHDSI SMLLKGTAVP ASEFCAENLN YPFELVWPVV EAFGLSVTLD
VGHLEFYGFP TAEYLERYLP YARVLHMHGT LEGKDHNSLS FMKPEALDLV MKALTDAPVQ
SRVFTLEIFS QEDFDSSCRV MERFVLSD
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