| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1205 |
|---|
| Symbol | |
|---|
| ID | 6463260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1260078 |
|---|
| End bp | 1260965 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642727453 |
|---|
| Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_002018094 |
|---|
| Protein GI | 194336300 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATTA TCGACGGAAA AAAGGTCTCG CTTGACCTGA AAAACGAACT GAAAGCCAGT
GTTGACAACT TCCGATCCAT CACAGGCAAA GTCCCGGGAC TGACGGTTAT CATTGTCGGC
CAGGATCCGG CATCGCAGGT TTATGTACGC AATAAAGCCA AAACATGCAA AGAGATTGGC
ATGATTTCCA CGGTGATTGA AATGGCCGAT GACACCACTG AAAAACATCT GATTGAGACT
ATTCACAAAC TGAACAACGA CCCGACGGTA CACGGTATTC TTGTCCAGCA ACCGCTTCCG
AAACAGATTG ATGAATTTGC CGTCACCCTT GCCATTGATC CATCAAAAGA TGTCGATGGA
TTTCATCCCG AAAATCTTGG TCGTCTTGTG ATGGGGCATC TCGACAAATG TTTTGTCAGT
TGCACCCCTT ATGGCATTCT TGAACTTCTC GGACGCTATA ACATTGAAAC GAGGGGTAAA
CATTGTGTTG TTGTCGGACG CAGCAATATT GTCGGCAAAC CTATGGCGAA CCTGATGCTG
CAGAAGCTCG ATGCCACCAA CTGCACCGTT ACCATCTGCC ACTCCGCCAC GAAAAATATA
CCATTCTACA CCCTGCAGGC CGACATCCTC ATCGCGGCTA TTGGCAAGGC AGGATTCATT
ACTGCTGATA TGGTAAAACC CGGAGCCGTG GTCATTGATG TCGGCATCAA CCGCATTGAG
GATCCATCGA CGAAAAGCGG CTACCGTCTC GTCGGGGATG TCGATTTCGA AGCTGTTTCA
ACCGTTGCTT CAGCCATGAC CCCCGTTCCC GGAGGAGTCG GTCCCATGAC CATTGCCATG
CTGCTGAAAA ACACGCTTCA GTCATTCCAG CGCATTAACA ATCTGTAG
|
|---|
| Protein sequence | MLIIDGKKVS LDLKNELKAS VDNFRSITGK VPGLTVIIVG QDPASQVYVR NKAKTCKEIG
MISTVIEMAD DTTEKHLIET IHKLNNDPTV HGILVQQPLP KQIDEFAVTL AIDPSKDVDG
FHPENLGRLV MGHLDKCFVS CTPYGILELL GRYNIETRGK HCVVVGRSNI VGKPMANLML
QKLDATNCTV TICHSATKNI PFYTLQADIL IAAIGKAGFI TADMVKPGAV VIDVGINRIE
DPSTKSGYRL VGDVDFEAVS TVASAMTPVP GGVGPMTIAM LLKNTLQSFQ RINNL
|
|---|
| |