Gene Ppha_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1142 
Symbol 
ID6463611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp1194039 
End bp1194716 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID642727390 
Productperoxiredoxin 
Protein accessionYP_002018034 
Protein GI194336240 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATC TTTATGATGA ACAGCCCTTT TATTCTGAGC TCAATATGCC ATTGCTTGGA 
GATGATTTCC CTGAGCTACA TGTCCAAACC ACTCACGGGC CGATGAACAT ACCAGCAGAT 
CTGGAAGGAT CGTGGTTTGT TCTCTTCAGC CACCCGGCTG ACTTTACCCC TGTCTGCACA 
ACAGAGTTTC TTGGTTTTCA GGAGAGAATG GCTGATTTTG AAAAGCTTGG ATGCAAACTT 
ATTGGCATGT CGATAGACCA GATTTTTTCA CACATCAAGT GGATAGAGTG GATCAAGGAT 
AACATGAATA TCGAGATCAC CTTTCCGATT GTAGCTGCCA ACGACAAAAT TGCTATGCAA 
CTCGGCATGT TGCACCCTGG AAAAGGATCC AATACCGTTC GTGCAGTCTT TATTGGGGAT 
CCAAAAGGCA AGGTGCGGCT CATCCTCTAT TACCCGCAAG AAATAGGTCG CAACATCGAT 
GAAGTGGTTC GCGCCGTCAA AGCACTGCAG ATTGCCGACA ACAAAAAAGT TGCCATTCCG 
GCAAACTGGC CAACCAACTC ATTGCTGAAA GATCAGGTGA TCATTCCGCC CGCCAACAAC 
ATTGAAGACG CAAAGAAACG CACTGGAATG AAGAATTGCT ACGACTGGTG GTTCTGCTAC 
AAGCCACTGG AAGAGTGA
 
Protein sequence
MSDLYDEQPF YSELNMPLLG DDFPELHVQT THGPMNIPAD LEGSWFVLFS HPADFTPVCT 
TEFLGFQERM ADFEKLGCKL IGMSIDQIFS HIKWIEWIKD NMNIEITFPI VAANDKIAMQ 
LGMLHPGKGS NTVRAVFIGD PKGKVRLILY YPQEIGRNID EVVRAVKALQ IADNKKVAIP 
ANWPTNSLLK DQVIIPPANN IEDAKKRTGM KNCYDWWFCY KPLEE