Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1061 |
Symbol | |
ID | 6462453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1092802 |
End bp | 1093953 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642727309 |
Product | sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002017959 |
Protein GI | 194336165 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.406887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAG AGACTACAAT TGTCGGGCAA TCTCTCCTGA TCTCCCAGCT CAAGCAACTT GCTCTCCAAG TCGCTCAAAC CGATATCACG GTATTAATAA TTGGAGAAAC GGGATCGGGA AAAGAGGTTC TGGCACGCTT TATTCATGCA AACAGCCTGC GGGCCGATAA AAGCTTCATC CCTGTCAATT GCGGCGCAAT TCCCTCCGGT ATTCTTGAAT CGGAACTTTT TGGTCATGAA AAGGGGGCGT TTACCGGAGC AGTGCAAAGC AGAAAGGGGT ACTTTGAAAG TGCCGACAGG GGCACTATTT TTCTTGATGA AATCGGTGAA ATGCCACTTG AAACCCAGGT AAAATTTCTC AGGGTTATTG AGACCGGAGA GTTTCAGCGG GTCGGATCGT CAGAGAGTAT TTACTCTGAT GCCCGCATCA TTGCTGCTAC CAACAAAAAC ATGTATCAGG CTGTCGCGGA AAAAAACTTT CGGGAAGATC TTTTTTACCG TCTGCGTAGT GTTGAACTGC AAATCCCGCC ACTACGGGAG AGAGGACGAG ATATCCTCCT GCTTGCCGAA AATTTTGTTC ATGAATTTGA ACAGAAACAC AAAATCCTCT TTGAAGGATT CAGCCCGGAT ACGACAGAGA TGCTGATGCG CTATCCCTGG CCAGGAAACG TCAGAGAGCT CAGAAATCTC ATTGAATCCC TGCTTGTGCT TGAAAAGGGG AAATATATCA CTTCTGAAAT TCTTGAACGA CATCTGGTGC AGCGAAATCG ATACAAAAGC CTGGTTCATG ATCCGGCTAA ATCAGAAAAA AACGAGCTTC AGGTGATTTA CAGTACCATG ATGCAGCTTC GACAGGAGGT CAGTGAAATC CGCCAACTTC TTCAGCATCT TGTGCAGACC AGAGCGCTCA CTCCACTGTT TCTGCCTGAT GTTTCAGCAA CACTCCCGCA ATTTACCCCT GTCTTGAAAC CAGCAGTCGA GGAACACATC CATCCTGCAC CACCCAAAGT TCTTCGCTCA CTTGATGAGA TGGAAAAAAA GTCTATTGCC GAAGCACTTG AATCATGCAA TGGAAACAAG AGAAAAACAG CTCTGGCACT CGGCATTACA GAACGAACAC TCTATCGCAA AATCAAGGCT TATGGGCTCT GA
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Protein sequence | MKRETTIVGQ SLLISQLKQL ALQVAQTDIT VLIIGETGSG KEVLARFIHA NSLRADKSFI PVNCGAIPSG ILESELFGHE KGAFTGAVQS RKGYFESADR GTIFLDEIGE MPLETQVKFL RVIETGEFQR VGSSESIYSD ARIIAATNKN MYQAVAEKNF REDLFYRLRS VELQIPPLRE RGRDILLLAE NFVHEFEQKH KILFEGFSPD TTEMLMRYPW PGNVRELRNL IESLLVLEKG KYITSEILER HLVQRNRYKS LVHDPAKSEK NELQVIYSTM MQLRQEVSEI RQLLQHLVQT RALTPLFLPD VSATLPQFTP VLKPAVEEHI HPAPPKVLRS LDEMEKKSIA EALESCNGNK RKTALALGIT ERTLYRKIKA YGL
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