Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0968 |
Symbol | |
ID | 6461082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1008074 |
End bp | 1008589 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642727221 |
Product | Protein of unknown function DUF1790 |
Protein accession | YP_002017871 |
Protein GI | 194336077 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTTG CAACACTTGT TGAAGAGTTT CTCGCCGATC TTGGCTGGGT AGACGGGATT GAGACCGAGG AACGGTTTGA GGGTGATGCC GGCTTACGGG TCATTACCGA AGTCAGGATC ACCATAGAAA ACCAGACATA TCGGCTCTTT ATCGACACCA TTGAAAAGTC GCAATGGCTC ATGCTTACTC TTTACCCGCC CTTCAAGGTG AATGAAGGAA AGTATGTTGA TGCCTGTATG CTCTTCAATT ATTTCAACAA CAATTACCTT TATGGGGGAC GCATAGCCGT TGACGACGAT GGAACCATAC GCTACCGTCA GATTATTGAT GTCAGTGACA CCGATCCATC AAAAAACCTG ATCAAGAATA TGCTGGAAAA CGGCATAGAT ATGTTTGAAC AGCATGCAGA AGCCATTGCC CTTGTTTCTC TGACAAAAAA ATCCTACGAA GCCATCCGTG AGGATATTGA AAAGAAAGCA GAGATTGAAA GAGTTAGAAA AATGGGTGAT CAGTGA
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Protein sequence | MRLATLVEEF LADLGWVDGI ETEERFEGDA GLRVITEVRI TIENQTYRLF IDTIEKSQWL MLTLYPPFKV NEGKYVDACM LFNYFNNNYL YGGRIAVDDD GTIRYRQIID VSDTDPSKNL IKNMLENGID MFEQHAEAIA LVSLTKKSYE AIREDIEKKA EIERVRKMGD Q
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