| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0950 |
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| Symbol | hemC |
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| ID | 6460865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 988720 |
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| End bp | 989661 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727204 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_002017854 |
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| Protein GI | 194336060 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAC AGCTTATCAT CGGTACCAGA TCCAGCCCGC TCGCTTTGTG GCAGGCAGAA
TTTACCAAGG CGGAACTGTC CAGGCATTTT CCTGAGCTTG ATATCACTCT CAAACTGGTT
AAAACAACCG GTGATGTCCT TCTCGACTCC CCGCTCTCCA AAATCGGAGA TATGGGACTT
TTCACCAAGG ACATTGAGAA ACATCTGATT ACCAAAGAGA TTGACCTGGC TGTTCACAGT
CTGAAAGATG TTCCGACGGC TACTCCTGAT GGGCTTATTA TTACCTCTTT CACCGAGCGA
GAGGATACAA GGGATGTCAT CATTTCGAAA AATGGTGTCA AACTGAAGGA TCTTCCCCAG
AATGCAAAAA TGGCAACCAG CAGCCTTCGC CGCATGTCGC AGTTGCTCAG CCTTCGTCCT
GATCTGGATA TCCGCGATAT CAGAGGCAAT CTCAATACCC GTTTCCAGAA GTTCGACAAC
GGCGAGTTCG ATGCCATGAT GCTTGCCTAT GCAGGTGTTT TCCGCCTCAA TTTCAGTGAC
CGTATTTCCG AAATCCTTCC GCATGAAGTG ATGCTTCCTG CTGTCGGACA GGGCGCTCTC
GGCATTGAGA CCCGTGTTGA TGACGAACAG ACAAGGGAGA TTGTCAGAAT CCTCAACCAC
TCCACAACGG AATATTGCTG CAGGGCAGAA CGCGCACTGC TTCGTCATCT TCAGGGTGGA
TGCCAGATTC CTATCGGCGC CTATGCTTCG TTTAAAAATG GCACACTGAC CTTGCTTGCC
TATGTCGGTT CGGTTGATGG AAAAATCGGA TTGCATAATA ACATCACAAA AACCGGACTT
ACTTCACCTG AACAGGCTGA AGCGGCTGGT ATTGAGCTTG CAGAGGAGTT GCTGAAACAG
GGTGCGGACG CAATTCTGTC ACAAATCCGT AAAACCCGCT GA
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| Protein sequence | MKKQLIIGTR SSPLALWQAE FTKAELSRHF PELDITLKLV KTTGDVLLDS PLSKIGDMGL
FTKDIEKHLI TKEIDLAVHS LKDVPTATPD GLIITSFTER EDTRDVIISK NGVKLKDLPQ
NAKMATSSLR RMSQLLSLRP DLDIRDIRGN LNTRFQKFDN GEFDAMMLAY AGVFRLNFSD
RISEILPHEV MLPAVGQGAL GIETRVDDEQ TREIVRILNH STTEYCCRAE RALLRHLQGG
CQIPIGAYAS FKNGTLTLLA YVGSVDGKIG LHNNITKTGL TSPEQAEAAG IELAEELLKQ
GADAILSQIR KTR
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