| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0725 |
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| Symbol | |
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| ID | 6461455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 755067 |
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| End bp | 756923 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726982 |
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| Product | Carbamoyl-phosphate synthetase large chain domain protein |
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| Protein accession | YP_002017637 |
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| Protein GI | 194335843 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTC AAGCTTCCGT CCTGACACAG GAGGTTATTG ACCTTTCCAG GAAATTCCCG
AAAGAGTGGC TTCTGAAAGC CAAGCAGAAC GGGTTTTCCG ATTTTCAGCT TGCCACCATT
TTCAATACTC CCGAACCCTC CATACGAGCG CTCAGAAAAC ATTACGGTGT TGAATCTGTC
TTCAAGACTG TCGACACCTG CGCAGCAGAA TTCGATGCAA AAACCCCTTA CCACTATTCG
ACCTATGAGG AGGAGAATGA GTCGGTCTCC TCTGACCGGA AAAAGGTGAT TATCCTTGGC
GGTGGCCCTA ACCGGATCGG ACAGGGCATT GAGTTTGACT ACTGTTGTGT GCAGGCGGTC
TTTGCCCTGA GGGAGGCTGG CTACGAAACC ATTATGGTTA ACTGCAACCC TGAAACCGTT
TCTACCGATT ACGATATAGC CGATAAACTC TACTTTGAGC CACTCACCTT TGAGGACACC
ATCCGCATTA TTGAGCATGA AAAACCGCTC GGCGTTATTG TAAGCTTTGG AGGCCAGACA
CCGCTGAAAC TTTCAGAAAA ACTGCATGAG GCTGGCGTAA CCATTCTCGG TACCTCCTCA
AAAGGGATTG ACCTGGCCGA AGACCGCAAA AAATTCGGAG CCCTTCTTGA AGAACTTGCT
ATCCCCCATC CCGAATACGG AACGGCCATA AATCTCGAAG AGGCCAAGGA GATTACCCGG
CGAATCGGCT ACCCTGCCCT TGTCAGGCCA AGTTACGTTC TCGGCGGGCG GGCGATGAAA
ATCGTCTACA GTGACGACTC ACTGAAAGAG TATATCGATC AGGCTCTTTT CATTACCGAA
AAATATCCCC TCCTGATCGA CCGCTTTCTT GAAACTGCCG TTGAGTTCGA TATTGATGCC
ATTGCCGACA GCACAGATTG CGTCATCAGC GGCATCATGC AACACGTTGA AGCTGCCGGT
ATTCACAGCG GCGACTCAAC ATCCATTCTG CCCTATTACA ATATCAGTCC AAAGGCCATC
GCCACCATGA AGGCCTATAC CCGCACATTG GCAGCAAACC TTAAGGTCGT TGGACTGATG
AACATTCAGT ATGCGGTGCA GAATGAGAGC GTCTATGTCA TTGAGGTCAA TCCAAGAGCA
AGCAGAACGG TGCCGTTTGT CGGCAAGGCA ACTGCAATTC CTGTTGTTAA AATTGCTACG
CGCGTCATGC TTGGAGAAAA GCTCAGCGAC CTGCGCCAGG AGTATGATCT GAAAGATTGC
GATGAGCTCG GAATGAAACA CCTCGCAATC AAGGAACCGG TCTTCCCGTT CTCCAAGTTT
GTCAAGTCAG GGGTCTATCT GGGCCCTGAA ATGCGCTCTA CCGGTGAAGC CATGAGCCTT
GCCGACGAGT TTCCGGAAGC CTTTGCCAAG GCATATCAGG CTGCAAACAT GCATCTGCCA
CTTTCGGGAG CGGTCTTCAT CAGCGTCAAT GACCAGGATA AAAACCCGCG CATTCTTGCT
ATTGCCCAGT CACTTTACCG CATGGACTTC GACCTGATTG CCACAGAGGG AACACACAGC
TTCCTGACCA AAAACGGCAT TGAATGTAAA AAGGTCTTCA AGGTCGGCGA AGAGGGCAGG
CCAAACATCT TCGATATTAT CAAACACGGC AAGATCAATT TTGTCATCAA TACCCCGAGA
GGTGAAAAAG CGCTGCATGA TGAAGAGGCC ATTGGAGCCG CATCAGTGCT GAACAATGTA
CCCTTTGTGA CCACCATCGA AGCCGCAGAA GCGTCGGTAC AGGCAATCGA CTGCATACGC
CATCAGGAAT TCGGGGTCAA AAGTCTTCAG GAGTATGCCT CCTACCGCAA CAAATAG
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| Protein sequence | MTIQASVLTQ EVIDLSRKFP KEWLLKAKQN GFSDFQLATI FNTPEPSIRA LRKHYGVESV
FKTVDTCAAE FDAKTPYHYS TYEEENESVS SDRKKVIILG GGPNRIGQGI EFDYCCVQAV
FALREAGYET IMVNCNPETV STDYDIADKL YFEPLTFEDT IRIIEHEKPL GVIVSFGGQT
PLKLSEKLHE AGVTILGTSS KGIDLAEDRK KFGALLEELA IPHPEYGTAI NLEEAKEITR
RIGYPALVRP SYVLGGRAMK IVYSDDSLKE YIDQALFITE KYPLLIDRFL ETAVEFDIDA
IADSTDCVIS GIMQHVEAAG IHSGDSTSIL PYYNISPKAI ATMKAYTRTL AANLKVVGLM
NIQYAVQNES VYVIEVNPRA SRTVPFVGKA TAIPVVKIAT RVMLGEKLSD LRQEYDLKDC
DELGMKHLAI KEPVFPFSKF VKSGVYLGPE MRSTGEAMSL ADEFPEAFAK AYQAANMHLP
LSGAVFISVN DQDKNPRILA IAQSLYRMDF DLIATEGTHS FLTKNGIECK KVFKVGEEGR
PNIFDIIKHG KINFVINTPR GEKALHDEEA IGAASVLNNV PFVTTIEAAE ASVQAIDCIR
HQEFGVKSLQ EYASYRNK
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