Gene Ppha_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0706 
Symbol 
ID6461491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp733787 
End bp734227 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content49% 
IMG OID642726963 
Productribonuclease H 
Protein accessionYP_002017618 
Protein GI194335824 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.572232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAA AGATAACGAT ATACACTGGA CGGCGCATTG CAGCGCAAAT CCGGGCCCTG 
CTGTCTGGGT GCGCTGTTGA TGTACGGCTT CACGATTCGT CAATAGCCGG ATACTCACCA
GCCACGACCA ACAACCGCAT GGAACTCAGC GCTGCAATAG AGGCGCTCGA AGCGCTCAAG
GAGCCTTGCC GTGTCGATTT GTACAGCGAC TCAAGCTACC TTGTCAACGC CATCAATGAA
GGGTGGCTGA AACGCTGGAC CATCAATAAC TGGAAAACAT CGACAAAAAA AAATGTCGAA
AACATCGATC TCTGGAAAAA AATCCTGAAG TTACTTACGT TACATACCAT AACGTTCCAT
AAGGTCAAGG GCCACAGCGA CAACCCCTAC AACAACCGTT GCGACACTCT GGCTCGCGAG
GCCATTAAAA AGAAATCATA A
 
Protein sequence
METKITIYTG RRIAAQIRAL LSGCAVDVRL HDSSIAGYSP ATTNNRMELS AAIEALEALK 
EPCRVDLYSD SSYLVNAINE GWLKRWTINN WKTSTKKNVE NIDLWKKILK LLTLHTITFH
KVKGHSDNPY NNRCDTLARE AIKKKS