Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0706 |
Symbol | |
ID | 6461491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 733787 |
End bp | 734227 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642726963 |
Product | ribonuclease H |
Protein accession | YP_002017618 |
Protein GI | 194335824 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.572232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAA AGATAACGAT ATACACTGGA CGGCGCATTG CAGCGCAAAT CCGGGCCCTG CTGTCTGGGT GCGCTGTTGA TGTACGGCTT CACGATTCGT CAATAGCCGG ATACTCACCA GCCACGACCA ACAACCGCAT GGAACTCAGC GCTGCAATAG AGGCGCTCGA AGCGCTCAAG GAGCCTTGCC GTGTCGATTT GTACAGCGAC TCAAGCTACC TTGTCAACGC CATCAATGAA GGGTGGCTGA AACGCTGGAC CATCAATAAC TGGAAAACAT CGACAAAAAA AAATGTCGAA AACATCGATC TCTGGAAAAA AATCCTGAAG TTACTTACGT TACATACCAT AACGTTCCAT AAGGTCAAGG GCCACAGCGA CAACCCCTAC AACAACCGTT GCGACACTCT GGCTCGCGAG GCCATTAAAA AGAAATCATA A
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Protein sequence | METKITIYTG RRIAAQIRAL LSGCAVDVRL HDSSIAGYSP ATTNNRMELS AAIEALEALK EPCRVDLYSD SSYLVNAINE GWLKRWTINN WKTSTKKNVE NIDLWKKILK LLTLHTITFH KVKGHSDNPY NNRCDTLARE AIKKKS
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