| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0593 |
|---|
| Symbol | |
|---|
| ID | 6461775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 576182 |
|---|
| End bp | 576508 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642726864 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002017519 |
|---|
| Protein GI | 194335725 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0244812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGATC TGCAATACCA GCCAGTACCA TACAATGTTG AGGAGGAGAT ACGCAAAAAC
CTTCAAGACG AGAATTTTCG CAGAGAATAT GAAGCACTGG AACCAAAATA CGCATTGATC
AGGGAGCTGT TATCTGCACG ACAGCACTCA GGCATGACGC AAGAAGCTGT GGCTCTGAAA
ATCGGGACGA CCAAAAGTGC CATCTCCAGA CTGGAATCCG GCAGCAAGCA TTCCCCCTCT
CTTACCACAC TGAGAAAATA CGCTAAAGCA GTTAATTGCG AACTGGAAAT CAAACTGAAA
CCAAAACAGC AACCGAAAAC AATCTGA
|
|---|
| Protein sequence | MDDLQYQPVP YNVEEEIRKN LQDENFRREY EALEPKYALI RELLSARQHS GMTQEAVALK
IGTTKSAISR LESGSKHSPS LTTLRKYAKA VNCELEIKLK PKQQPKTI
|
|---|
| |