| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0523 |
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| Symbol | |
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| ID | 6461978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 512122 |
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| End bp | 513837 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726809 |
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| Product | ABC transporter related |
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| Protein accession | YP_002017464 |
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| Protein GI | 194335670 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTGCG CATCCTTCGC CGAAATACTC AGCATAGGCG CTGTGCTTCC ATTTCTTGCC
GTCCTCACCG CCCCGGAAAG AATCTTCCAG CTCCCGGCAG CCCAGCCATT CATCCGGGCG
ATTGGAATGA CGAGTGCAAG CCAGCTCCTC TTTCCGCTCA CCATCACCTT CGGTATAGCA
GCGCTTATCT CCGGAGCCAT GCGTCTTCTG CTCCTCTGGG CAAGCACTCG CCTCTCCTTT
GCAACAGGGG CCGACCTCAG CATCAGCATC TACCGCCGCA CCCTCTATCA ACCATACTCT
GTTCATGTGG CACGCAACAG CAGCGAGGTG ATCAGTGGTA TCTCTGGTAA AGCCAACGGA
GTCATCTATA CGACTATTGT ACCATCATTG ACGCTCATCA GTTCGAGTAT CATGCTTGTT
ACTATTCTCA TTGCTCTCTT GGTGGTTGAT CCCGTTATTG CGTTGTCTGC CTTTAGTGGT
TTTGGTCTCA TTTACGCTGT AATCATCAGG CTTACACGCA AGCAGCAGTT GATCAACAGC
AAATGCGTGG CGAAGGAGTC TACTCAGGTG ATCAAGTCTT TGCAGGAGGG CTTGGGTGGT
ATACGTGATG TCCTCATCGA TGGTAGTCAG GCAGCTTACT GTCAAATCTA TCGCAATGCT
GACCAGCCAT TGCGGAAAGC ACAGGGAAAC AACGCTTTTA TTGGAACGAG TCCACGTTTT
GGCATTGAAG CACTTGGCAT GATGCTTATA GCGGTTTTGG CCTATGTGCT TGCTATGCAG
CCTGATGGTA TAGCCAAAGC AATTCCTGTT CTCGGTGCCT TGGCACTCGG TGCACAGCGC
ATGCTGCCAG TATTGCAAGG GGCTTATGGT TCATGGTCAA GCATACAGGG CGGGCAAATC
TCGTTGCGGG ATACACTTGA TCTGCTTGAT CAGCCGTTGC CGGATTATGT GGATCAGCCG
GTCGCCAAAC CTTTGCCGTT CAATATGCAC ATCGGCCTGC ACAATCTCTC GTTTCGCTAT
ACAGAACAAA CCCCTTGGGT GCTGCAAAAT CTTGATCTGA CTATTCCTAA GGGCAGTCGT
ATTGGCTTTA TCGGTATTAC TGGCAGTGGC AAGAGTACAC TGCTTGATAT CGTCATGGGA
CTTCTTGCGC CGACTGATGG AACATTGGAA ATTGATAGCC AGCCCATTGT AACGGGTAAC
AATCGTGCCT GGCAGGCCCA TATCGCACAC GTCCCTCAAG CGATCTATCT TGCTGACAGT
ACCATAGAAG AGAACATTGC CTTCGGTGTG CCAAAAGGGA AGATCGATCA GAGCCGGGTC
AAGCAGGCAG CTCAAAAGGC TCAGATTGCC GATATCATCG AAAGCTGGCC TAAAAAGTAC
CAGACCTATG TCGGTGAGCG GGGGATCCGC CTCTCCGGCG GCCAGCGACA GCGCATCGGC
ATCGCCCGTG CACTATATAA GCAGGCCGAC GTCATCATTT TTGACGAAGC CACCAGCGCC
CTCGATAACG AAACCGAACA AGCCGTCATG CAAGCCATCG AAAGTCTCGG CGATGATCTC
ACCGTCCTGA TAATCGCCCA CCGCCTCACA ACCCTGAAAA ACTGCACCAA AATCGTAGAA
CTGGCTGATG GCGGAATCAA ACAAACCGGC ACCTACCAAG AGATCATATC CCCTGTAAGG
TCGGGTTCAT CCCGCCCCCT GTCACTCACA ACGTAA
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| Protein sequence | MVCASFAEIL SIGAVLPFLA VLTAPERIFQ LPAAQPFIRA IGMTSASQLL FPLTITFGIA
ALISGAMRLL LLWASTRLSF ATGADLSISI YRRTLYQPYS VHVARNSSEV ISGISGKANG
VIYTTIVPSL TLISSSIMLV TILIALLVVD PVIALSAFSG FGLIYAVIIR LTRKQQLINS
KCVAKESTQV IKSLQEGLGG IRDVLIDGSQ AAYCQIYRNA DQPLRKAQGN NAFIGTSPRF
GIEALGMMLI AVLAYVLAMQ PDGIAKAIPV LGALALGAQR MLPVLQGAYG SWSSIQGGQI
SLRDTLDLLD QPLPDYVDQP VAKPLPFNMH IGLHNLSFRY TEQTPWVLQN LDLTIPKGSR
IGFIGITGSG KSTLLDIVMG LLAPTDGTLE IDSQPIVTGN NRAWQAHIAH VPQAIYLADS
TIEENIAFGV PKGKIDQSRV KQAAQKAQIA DIIESWPKKY QTYVGERGIR LSGGQRQRIG
IARALYKQAD VIIFDEATSA LDNETEQAVM QAIESLGDDL TVLIIAHRLT TLKNCTKIVE
LADGGIKQTG TYQEIISPVR SGSSRPLSLT T
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