| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0480 |
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| Symbol | |
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| ID | 6462089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 468929 |
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| End bp | 470152 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642726768 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002017423 |
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| Protein GI | 194335629 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTT TCCGCTCTAT TCTCCCGTTT CTCGTTGCGA CATGTTTTTC TTCTGCCGCT
CTGGCTGCCA ATGTCGTCAA GATTGCCATC ACAGGTCCTT TTTCAGGCGG ATCAGCCCCG
ATGGGCGCCT CTATGAGGGA TGGCGCCAAG CTGGCTTTTT CCCAGATCAA TCAGAAAGGC
GGTATCAATG TCGGCGGAAC CATGATGCGC GTGGAGCTGA TTGAACGCGA CGATGAGGGG
AAAAATGATC GTGGCGCCCT GATTGCCCAG GAGATTTCGT CGATGAGCGA TGTCTCGGCC
GTCATCGGGA CGGTCAACAC CGGTATTGCT GTGATGGGTG ACAAGTATTA CGTTGAGAAG
GGAATCGTCA AAATCATTAC TCCTGCCGCC GGAAGCGCCT CAATGACGCA ATGGAGCAGT
GCGGGTAACA GGGAGCTGCC TATTTTCCGC TTTGCCGCAC ATGATGGCAT TCAGTCACAG
ATGGTTGTAG AGCAGGCTGT AAAGATGGGG TGCCGGAAGG TTGCAATTTT GCACGATGCA
ACAAACTACG GGGTTTCGGG ACGTGATGAC CTTATCCGCC AGGTCAACAG GCAGGGTGGC
AGGCTGAAAG TGGTGGCTAT CGAGAAGTTC GGCATCGGTG ACAAGGATAT GACCGGGCAG
CTCATCAAGG CGAAGGCCGC CGGTGCACAG GCAATCCTTA TCTGGGGTAT CGGGCCTGAG
CTTGCCGCCG TTGCCTCAGG GAAGCAGAAA CTGGGTTTCA GGGTTCCTCT GATTGGGGGA
TGGCCACTCT CCATGAGCAA TTTTATTGAT ACGGCCGGGG CTGCTGGCAA TGGCGCTTTG
ATGCCACAGA CCTTTATTGA GGATGAGTCG ATAGCAAGGG CGAAACCTTT TATACAGGCT
TACCGCAGGG CTTATGGCGT CGCAAGGATT CCTTCTCCGG TTTCGGCTGC ACAGGGTTAT
GACGCGGCCC TGCTGCTTGC TGAGGCTATT CATGAGGCGG GTTCTACGAA GCCGTCGAGC
ATCAAGAGTG CATTGGAAAA TCTCAAGGTG ACCGTCAGGG GGAGCATCGC TGACTGGAAA
AAGCCATGGT CGAAGTGGAA TCCGGCAAAT GTGGAGACAC ATGAGGCCTT CCGCCGCTCG
AACACGGTCA TGGGCAAGGT GCAGAACAGC AGGGTTGTGC TGGCTAATCC GGCTGACCGG
AGTGTGCTGG AGGGAAAGAG GTAA
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| Protein sequence | MNAFRSILPF LVATCFSSAA LAANVVKIAI TGPFSGGSAP MGASMRDGAK LAFSQINQKG
GINVGGTMMR VELIERDDEG KNDRGALIAQ EISSMSDVSA VIGTVNTGIA VMGDKYYVEK
GIVKIITPAA GSASMTQWSS AGNRELPIFR FAAHDGIQSQ MVVEQAVKMG CRKVAILHDA
TNYGVSGRDD LIRQVNRQGG RLKVVAIEKF GIGDKDMTGQ LIKAKAAGAQ AILIWGIGPE
LAAVASGKQK LGFRVPLIGG WPLSMSNFID TAGAAGNGAL MPQTFIEDES IARAKPFIQA
YRRAYGVARI PSPVSAAQGY DAALLLAEAI HEAGSTKPSS IKSALENLKV TVRGSIADWK
KPWSKWNPAN VETHEAFRRS NTVMGKVQNS RVVLANPADR SVLEGKR
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