10 homologs were found in PanDaTox collection
for query gene Ppha_0409 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_0409  protein of unknown function DUF1239  100 
 
 
168 aa  343  7e-94  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.206446  n/a   
 
 
-
 
NC_007512  Plut_1768  hypothetical protein  55.42 
 
 
194 aa  196  2.0000000000000003e-49  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.264909 
 
 
-
 
NC_008639  Cpha266_0380  hypothetical protein  58.9 
 
 
164 aa  189  2e-47  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0448468  n/a   
 
 
-
 
NC_007514  Cag_1449  hypothetical protein  53.8 
 
 
170 aa  182  1.0000000000000001e-45  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0311  protein of unknown function DUF1239  53.15 
 
 
147 aa  162  3e-39  Chlorobium limicola DSM 245  Bacteria  normal  0.287368  n/a   
 
 
-
 
NC_010831  Cphamn1_0413  protein of unknown function DUF1239  44.24 
 
 
184 aa  148  3e-35  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.393181 
 
 
-
 
NC_011059  Paes_0380  protein of unknown function DUF1239  46.31 
 
 
152 aa  134  6.0000000000000005e-31  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0920117 
 
 
-
 
NC_013501  Rmar_0593  hypothetical protein  26.97 
 
 
189 aa  57  0.0000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.884669  n/a   
 
 
-
 
NC_014230  CA2559_04210  hypothetical protein  22.29 
 
 
188 aa  48.9  0.00003  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.215001  n/a   
 
 
-
 
NC_009441  Fjoh_1413  hypothetical protein  25.45 
 
 
185 aa  42  0.004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.934986  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>