Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0308 |
Symbol | rplO |
ID | 6461540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 296731 |
End bp | 297285 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642726600 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_002017258 |
Protein GI | 194335464 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0135677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAA GTTCACTTCG TCCTGCAAAA GGCGCAGTAA AAAACAAAAA GAGGGTCGGT CGCGGTCAAG GTTCAGGTAA CGGAACGACC GCTGGCAAGG GAAATAATGG TCAGCAGTCA CGTAGCGGCT ACAAAAGACC TATTATTGAA GGCGGCCAAG TACCTGTTTA CCGGAGATTG CCAAAATTCG GTTTTACTCC TCTTGATAAG AAGCCGGTAA ATACGGTCAA TCTTACCCAG ATCGATAAAT GGATTCAGGA TGGTCTTGTA GAAAACGAGA TTACCATTCT TGATCTCAAA TCGCTTCTGC ATGCGAGTAA TGCTGATTAT TTCAAGATTC TCGGCAATGG TGAACTGACA AGCGCTATCA CCATTACCGC TCATGCTTTC AGCAAAAGTG CCGAGGAGAA AATAGCCGCA GCAGGCGGAA CAGTAGTGAA AGCCTTCCGT ACGCTGGAAG AGGCATCCAA GGTCAGGGAT CTGCCGTTTG AAGAGGCTCT CCTGAAACCA AAGGCAAAGC TCGTAAAGAG AGCAAAAAAA TCCACCAAGC CTTGA
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Protein sequence | MDLSSLRPAK GAVKNKKRVG RGQGSGNGTT AGKGNNGQQS RSGYKRPIIE GGQVPVYRRL PKFGFTPLDK KPVNTVNLTQ IDKWIQDGLV ENEITILDLK SLLHASNADY FKILGNGELT SAITITAHAF SKSAEEKIAA AGGTVVKAFR TLEEASKVRD LPFEEALLKP KAKLVKRAKK STKP
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