Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0207 |
Symbol | |
ID | 6462482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 202317 |
End bp | 203138 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642726502 |
Product | ABC-3 protein |
Protein accession | YP_002017161 |
Protein GI | 194335367 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.135711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCAAG AGATATTTGC CTTTGAATTC ATGCGTAATG CGCTCCTTGC AGCACTGCTT TCCAGTGTTG CCTGTGGTGT TATTGGCACC TATGTGGTGG TCAAAAAGAT TGGTTTTATC AGTGGAGGTA TCGCGCATAC GGCGTTTGGA GGGATTGGGC TGGGCTACTA CCTTGGGATC AATCCGCTGC TTGGCGTTAT TCCGTTCAGT TTGGCTGCAG CGCTGGCTAT TGGTCTGTTG AGCAAGAAGG GAAAGGTTGC TGAAGATACC GCAATCGGAA CGTTCTGGGC GGTCGGAATG GCCGTTGGAG TTCTTTTTAT CGGCCTTAAG CCGGGGTATG CTCCCGATCT CTTCAGCTAT CTTTTTGGCA ATATTCTGAC GGTTCCATCA TTTGATCTGT GGATGATTCT GTTGCTCGAT CTGCTTATTC TTGCTGTGGT ATGGCTGCTG AGCAAGGAAT TTCTTGCTAT CTCGTTTGAT GAGGAGTATG CTGCCGTATC GGGGTTGCAG ACAACGGCAC TCTATCTTGT AATGCTCTGT CTGATTGCCC TGACGGTGGT GGTTATGGTG CGTGTTGTGG GTATTGTGAT GGTGATTGCG CTTCTGACGA TTCCTGCAGC CATTGCGCGG ATGCTGAGCC GCAGCTTGCC AGGGATGATG GTTCGGGCAG TTGTGCTTTC AGCGCTTTTC AGCATTTTGG GGCTCTGGCT CTCCTTTTTG CTTGATATTG CTTCCGGAGC AACCATTATT CTTGTTGCAG GGTTTTCCTT TTTTCTTGCG CAAGGATGGC GATTCGTCAG CACGTTCTTG AGGGGTCGAT AA
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Protein sequence | MLQEIFAFEF MRNALLAALL SSVACGVIGT YVVVKKIGFI SGGIAHTAFG GIGLGYYLGI NPLLGVIPFS LAAALAIGLL SKKGKVAEDT AIGTFWAVGM AVGVLFIGLK PGYAPDLFSY LFGNILTVPS FDLWMILLLD LLILAVVWLL SKEFLAISFD EEYAAVSGLQ TTALYLVMLC LIALTVVVMV RVVGIVMVIA LLTIPAAIAR MLSRSLPGMM VRAVVLSALF SILGLWLSFL LDIASGATII LVAGFSFFLA QGWRFVSTFL RGR
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