| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_2082 |
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| Symbol | |
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| ID | 5052905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2152272 |
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| End bp | 2153507 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640472257 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001156857 |
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| Protein GI | 145590260 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.574106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAC CCCAACACCA TGACATCGTG GTGATTGGGG CAGGCATTTG TGGTGCAACC
ATTAGCAATG AGTTGCTTGA GCGGGGCAAA TCCGTTTGCA TTATCGATGC CTCCCCCTCT
CCTGCAAGCG CTTGCTCTAG CCACGCTTAC GCTATTGCGC ACCCTCATAT TGGTAAAGGC
TCACCCAGAC TATTGCGTTT GACTCGCCTT GCTTTTTTAT TAGCAGAGGC CCGCTGGTCA
AAGGTTTGGC AGCAGCATGG CATATTTCAG CCAACCAAAA AAGACAGGGT TTTTGACAGG
GCCGAAGTAT TGGCGCATCT CCAGTCGCTC GATCTTAAAG AGGATATTGC CGTTCCTTTA
GATTCTGAAG AGGCCGAGAA AATTTGTGGC ATTTCACAAA GTGGCGTTTG GCTTCCTCGC
GGAGCTTGCC TAAATTTATA CGAGACGAGC AAACAGCTCC TGCAAAAGCA TGAGCGACTT
ACCTGTCTTT GGAATACAAA CGTAGTGCGC CTGGAAAGTG TTGATGGAAG ATGGCTGTTA
TTTAATAAAA CTAATCAAGC AATTGTTTCT GCAAATAAGA TTGTTATTTC AGCGGCGATG
CAGTCAAAAG GGTTAATGGC TAGCGTTGGT ATTCGCTTAC CGTTAAAGCC GGTGCGTGGT
CAGCTGAGCA TTTTCAATAT CAAGGCCGGC GACCCCTGGG TGAGTAAGCT GCCTGGGGTC
GGTATCACGG GAGACGGGTA CTGTTTGCCC GCGGAACAAC TGGAAGATGG GAGCTATCGT
TGGATAGTGG GTTCCAGTTT TGACGAGGGA GAGGACGACC TTCATTCAAG AGAAAGCAGC
GTTGACTTTA ATCGTGAACA AGCCAAAGGC CTTGTCGATT TTCCCGCTGG TGATCCAAGA
GCTTTAGTTA AGGCTGGTGA ATTTGTTGGC GTGCGTTGTG TGGCGGGCGA TAGACTGCCG
ATGATCGGCC CCATCATTCA GCGACCAGGA ATTTTCATGG CCACAGCCTT AGGCTCACGC
GGTATTTTAT GGTCGGCCCT AGCGGCCAAG CTAGTGACAG CTCAGCTACT AGAGGATGAC
TTTGCTTTAC TTGCGCGCTT GGGTTTTGCT ACAGACTTGG TTGCTGCACT AGCCCCTGCA
CGTTTCTTTG CGGGTGCTTT AGCCGCACCA CCAGCTTTGG GCGCCTTAGC CTCAAATTCA
AAGCCAATTT TTCCATCTGC ACCTAAAGCC AAGTAA
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| Protein sequence | MTQPQHHDIV VIGAGICGAT ISNELLERGK SVCIIDASPS PASACSSHAY AIAHPHIGKG
SPRLLRLTRL AFLLAEARWS KVWQQHGIFQ PTKKDRVFDR AEVLAHLQSL DLKEDIAVPL
DSEEAEKICG ISQSGVWLPR GACLNLYETS KQLLQKHERL TCLWNTNVVR LESVDGRWLL
FNKTNQAIVS ANKIVISAAM QSKGLMASVG IRLPLKPVRG QLSIFNIKAG DPWVSKLPGV
GITGDGYCLP AEQLEDGSYR WIVGSSFDEG EDDLHSRESS VDFNREQAKG LVDFPAGDPR
ALVKAGEFVG VRCVAGDRLP MIGPIIQRPG IFMATALGSR GILWSALAAK LVTAQLLEDD
FALLARLGFA TDLVAALAPA RFFAGALAAP PALGALASNS KPIFPSAPKA K
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