| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1988 |
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| Symbol | |
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| ID | 5053128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 2055613 |
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| End bp | 2058648 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640472162 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001156763 |
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| Protein GI | 145590166 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGA CTGATCTATT TATTCGCAGG CCAGTGCTCT CGCTGGTGGT GAGTGCGCTT
GTCCTGGTGT TTGGCTTGAA GGCGATTGGC TCATTGCCGG TCAATCAATA TCCGCAGACG
CAAAATGCGA TTGTCACGAT TACTACTGCC TATTATGGCG CAGATCCAGA GACGATTGCA
GGCTTCATTA CGCAACCTCT AGAGGCATCT ATTGCGCAAG CACAGGGTAT TGATTACTTG
TCTTCAACTA GCGTGAGTGG TGTATCGACC ATCATTGCTA CCTTGAAGCT GAATTACGAC
TCCAATGCGG CATTGACTCA GATTCAGACG CAAATTAGCG CGGTGAAGAA CCAACTGCCA
CCACAAGCAC AACAACCTGT TCTTACAGTT CAGGTCGGTC AGTCCACTGC AGCGATGTAT
ATGGGTTTCT ACAGTGATGA GATTCCTAAT AATGCGATTA CCGATTACCT CTTAAGGGTC
GTTAAGCCAA AGCTGGATTC AGTTGAGGGT GTGCAGAATG CGGAGATCAC AGGAGGTCGT
AAATTTGCAT TACGCGCTTG GCTAGATCGC GAAAAAATGG CTGGTCTGGG TGTAGGGGCT
GATGATGTCT TTAGCGCTAT GTCTGCCAAT AACTACTTAT CTGCAGTGGG AAGCACCAAA
GGCGATATGG TTTCTGTCGA CTTAGTTGCA GGAACAGACT TACATACATT GGATGAGTTT
CGTAAATTGG TCATCAAGAA TGATGGCGTT AATATCGTCT ACCTTGATCA GGTGGCGACA
GTCACTTTAG GTTCGGAAGA CTACAACACC AATGTGGCCT TTAGCGGCAA GAAATCGGTA
TTTATTGCGA TCAAAGTTGC CCCACAAGCT AACTTATTGG ATGTCGCGCA GCGGGTGCGT
GATGTAGTCC CCAGCATTCA GAAGCAACTT CCTATCGGAA TGACGGGAAA GATTGTTTAT
GACTCCACGA TATTTATTAC CAGCTCTATT GATGAGGTGG TCTCCACTTT GCTTGAAGCC
TTATTTATTG TGACGGTGGT GATTTATCTC TTCTTGGGAA GCGTGCGTGC AGTAGCTGTT
CCGGTAATAG CAATGCCCCT GTCATTAATT GGCACTTTCT TCTTAATGCA GATTTTGGGC
TATTCCATTA ATTTGCTTAC CCTCTTGGCC TTGGTTCTCG CAATTGGTTT GGTGGTGGAT
GACGCCATTA TTGTGGTGGA AAACGTTGAC CGTCATATGA AGGAGGGCAA GTCTCCTTTA
GAGGCGTCTT TGATTGCCGC ACGAGAATTA GGCGGCCCAA TTTTGGCGAT GACAGTCGTC
TTAATTGCTG TATATATTCC GATTGGATTT CAGGGTGGTT TAACAGGAGC CTTATTTACT
GAGTTCGCCT TTACCTTGGC TAGTGCAGTT GCAGTATCGG GTTTGATTGC CTTAACGCTT
TCCCCTATGA TGTGCTCCCG CATCTTTACT GAAGAGCAAG AGGCCTCTCC GTTTGTGCAA
AAGATCGATA AGATCTTTGA TAAGGTACAC CATAGCTACC AATCGACTCT GCGTGAATTG
CTCAGTACCT GGCAAGTCAT TATTGTGATG GGGGCAATTT TATTGGGTGG TGTTGCGTAT
CTCTATTCAA CTGCTCGTTC AGAATTAGCG CCTACAGAGG ATCAAGGCAT TGTCTTGATG
CAAGCCTCTG GCCCTCCCAA TAGCACCGTG ACTCAAATGC AAACGTATGC GGATCAGATT
TATGCAATTG CTAGCGCTGA ACCCGAATAT GAACAGGCAT TCCAAATTAC CAGTCCAACG
TCTAGCTTTG GCGGAATCTT GCTAAAAGAC TGGAGCTCAC GTAGTCGTAA TGCAACCAAG
TTCCAAGAAG ATATGCAGCA AAAGTGGAAT ACGATTGCAG GCGCTAGGGT AGCTGCTTTC
CAGTTTCCTG CATTACCAGG TGCTCAGGGC TTACCGGTGC AAGTAGTTAT TAATACGACT
GAGTCCTACG AGCAGCTTAA TGAAGTATCT CAAGCTGTTT TAGATAAAGT ACGACGGAGT
GGCAACTTTT TCTTTGTGGA TTCCGATTTA AAGATTGATA AGCCACAAGA CGTATTAGTG
ATCGATCGAG AGAAGGTAGC CGCCTTAGGA ATGACTCAGC AACAAGTGGG CTCCGCCCTC
TCTGCAGCAT TGGGTGGTGG GTATGTGAAC TACTTCTCAG TAGCGGGCCG CTCTTATAAG
GTAATCCCTC AAGTAAAACA GGTAGATCGC TTAAATCCAG ATCAAATCTT GGATTACTAC
ATTCGTACCC CTAGTGGCGC CATGGTTCAA GCGCGCACGA TTGCCAGCAT CAAACAAAAA
GTAGTTCCAC AATCGATTAA CCACTTTCAG CAACTGAACT CAGCAACGAT TTCTGGAGTA
AGTACACCAT TTATTTCGCA GGCTGACTTG CTGGAATATA TGCGCCAGAC CTTGAAAGAA
GTTGCCCCTA ACGGCTACAG CATGGACTAC GCTGGACCCT CTCGTCAGTT CATGGCTGAG
TCAGGCGGCT TCTTGGTAAC GATGTTCTTC GCGATTTTGA TTGTGTTCTT GGTGCTTGCT
GCGCAGTTTG AAAGCTTCCG CGATCCTATC GTGATCTTGG TCTCTGTACC GATGGCTTTA
TTTGGCGCAT TAATTTTTAT TAATTTAGGT TTTACGACGC TTAACGTGTA TACGCAGGTC
GGTTTGGTAA CGCTGATGGG CTTGATTAGT AAACACGGAA TTTTGATTGT CGAATTTGCC
AATGAATTAC AAGAAGCTGG GCGCAGCAAA TTAGATGCGA TTGTGGAGGC TAGTAGCGTA
CGTTTGAGGC CTATTCTGAT GACCACCGCA GCCATGGTAT TGGGCGTCTT ACCTTTGGTG
ATTGCTTCTG GGGCAGGTGC TGCAGGTCGA CAGTCGATGG GCATTGTGAT CTTTACCGGC
TTATCTATTG GTACCCTGTT TACTTTATTC GTGGTGCCTG CGATGTATCT ATTTATTGGC
GCAGACCATC ATCAAAAGAA ATTTAAAGAG ACTTGA
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| Protein sequence | MKWTDLFIRR PVLSLVVSAL VLVFGLKAIG SLPVNQYPQT QNAIVTITTA YYGADPETIA
GFITQPLEAS IAQAQGIDYL SSTSVSGVST IIATLKLNYD SNAALTQIQT QISAVKNQLP
PQAQQPVLTV QVGQSTAAMY MGFYSDEIPN NAITDYLLRV VKPKLDSVEG VQNAEITGGR
KFALRAWLDR EKMAGLGVGA DDVFSAMSAN NYLSAVGSTK GDMVSVDLVA GTDLHTLDEF
RKLVIKNDGV NIVYLDQVAT VTLGSEDYNT NVAFSGKKSV FIAIKVAPQA NLLDVAQRVR
DVVPSIQKQL PIGMTGKIVY DSTIFITSSI DEVVSTLLEA LFIVTVVIYL FLGSVRAVAV
PVIAMPLSLI GTFFLMQILG YSINLLTLLA LVLAIGLVVD DAIIVVENVD RHMKEGKSPL
EASLIAAREL GGPILAMTVV LIAVYIPIGF QGGLTGALFT EFAFTLASAV AVSGLIALTL
SPMMCSRIFT EEQEASPFVQ KIDKIFDKVH HSYQSTLREL LSTWQVIIVM GAILLGGVAY
LYSTARSELA PTEDQGIVLM QASGPPNSTV TQMQTYADQI YAIASAEPEY EQAFQITSPT
SSFGGILLKD WSSRSRNATK FQEDMQQKWN TIAGARVAAF QFPALPGAQG LPVQVVINTT
ESYEQLNEVS QAVLDKVRRS GNFFFVDSDL KIDKPQDVLV IDREKVAALG MTQQQVGSAL
SAALGGGYVN YFSVAGRSYK VIPQVKQVDR LNPDQILDYY IRTPSGAMVQ ARTIASIKQK
VVPQSINHFQ QLNSATISGV STPFISQADL LEYMRQTLKE VAPNGYSMDY AGPSRQFMAE
SGGFLVTMFF AILIVFLVLA AQFESFRDPI VILVSVPMAL FGALIFINLG FTTLNVYTQV
GLVTLMGLIS KHGILIVEFA NELQEAGRSK LDAIVEASSV RLRPILMTTA AMVLGVLPLV
IASGAGAAGR QSMGIVIFTG LSIGTLFTLF VVPAMYLFIG ADHHQKKFKE T
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