Gene Pnuc_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1983 
Symbol 
ID5053995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp2052812 
End bp2052988 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content45% 
IMG OID640472157 
Producthypothetical protein 
Protein accessionYP_001156758 
Protein GI145590161 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTTCAG TTCCATCACC TTGCATCAAC TTATGCGACA TGAATCCCGA AAATGGTTAC 
TGTCGAGGAT GCTATCGCAC GCTCAATGAA ATCGCAGACT GGTCTGATTT ATCTAATATG
GAAAAGCTTG CGGTTTGGTC GCAACTGTCT AAACGCAAAC CCCAAGCTCC CCAATAG
 
Protein sequence
MTSVPSPCIN LCDMNPENGY CRGCYRTLNE IADWSDLSNM EKLAVWSQLS KRKPQAPQ