Gene Pnuc_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1801 
Symbol 
ID5053595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1880064 
End bp1880903 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content38% 
IMG OID640471974 
Productglycosyl transferase family protein 
Protein accessionYP_001156578 
Protein GI145589981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.124844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGCG TAGAAATGAT AGGCCGCCTT GGAAATCATA TGTGGCAATA TGCCGTATGC 
CGTACGTTGG CAGAGAGAAA TGGCTACGAG TTCCATGTCC CTAGATCTTT TTTGGGCGCA 
GAATTATTTG ACTGCTCCCT TGGTGTTGAG GTTGATCAAA CAAAGATGCA ATATACAGAT 
AGCTATATGC ATAATAGTTT TATGGCGCAG TTTTACAACC CCAATATTAT TCACTTACAA 
GATTTCACAA AACTAGTTGG ATTCTTTCAG TCAGAAAGAT ATATTCTTGA AAATAAAAAA 
AATATCCAAG AATGGTTTGA GCTAAAAAAT CCTAATCTTG AGCTAATTGA CAAGTTAAAT 
CTTACAGATG AGGTATGTAT CATTAACTTT AGGGGCGGGG ACTACAAAGA TATTCCGGAT 
GTCTATTTAA GCTCTGATTA CTGGAATAAT TCAGTTGAGC AAATGAAAAA GCTCCATGAC 
AATTTAAAAT TTATCGTTAT TACTGATGAT GTTGATGCCG CGGAAAAATT ATTCCCCGAT 
TTCCCCGCAT ATCACTTTAG CGTTGCTGAA GACTTTCTAG TAATTACCCA TGCGAAATAC 
TTAATCATTG CTAACTCTAC CTTTTCTTGG TGGGGGGCTT GGTTAAATAA ATTTTGCAAA 
ACGGTGATTG CCCCTAAGTT TTGGATGAGG CATAACCAAA GCAATGGGTG GTGGGCGCCC 
GGCGAGAGTA TTACTAAAGG ATTTTTGTAT ATGGGCAAGG ATGGAAAGTT GTATTCCTCA 
AGCGAGTGTA TTGATGAAGT CAATGCGCTT GGCCTTAGTT ATTCAAAATT CCCTTATTAA
 
Protein sequence
MISVEMIGRL GNHMWQYAVC RTLAERNGYE FHVPRSFLGA ELFDCSLGVE VDQTKMQYTD 
SYMHNSFMAQ FYNPNIIHLQ DFTKLVGFFQ SERYILENKK NIQEWFELKN PNLELIDKLN 
LTDEVCIINF RGGDYKDIPD VYLSSDYWNN SVEQMKKLHD NLKFIVITDD VDAAEKLFPD 
FPAYHFSVAE DFLVITHAKY LIIANSTFSW WGAWLNKFCK TVIAPKFWMR HNQSNGWWAP 
GESITKGFLY MGKDGKLYSS SECIDEVNAL GLSYSKFPY