Gene Pnuc_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1782 
Symbol 
ID5051949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1858814 
End bp1859959 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content47% 
IMG OID640471955 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001156559 
Protein GI145589962 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAT CCAATTCACA AATCAATGCA TTCCGTGAAC AGATTCTGAA TGCAGGTAAA 
AATAAAACGT CACTTTCAAT TGAAGGTGGC GGCACAAAAT CTTGGTATGG AAACGTAAAC 
AAGTACAGCA AGTTGGATAC ACGCCCTTAC TCCGGAATTT TGGAATATCA ACCAGAAGAA 
TTAGTCATTA CGGCCTGTGC TGGTACGCCA CTGAAAGAAA TTGAGGCTGC CCTCCAGGAG 
AAAAATCAAG TGCTTGCATT TGAGCCCCCT CACTTTGGTG AGAATGCAAC GTTTGGTGGC 
GCTATTGCTG CAGGTCTGGC TGGTCCAGGT CGCATTACCG TTGGCAACTT CCGAGATTTT 
GTTTTAGGTA CCCGCATTTT GGATGGTAAG GGTCAAGACC TTTCTTTTGG TGGCAAAGTA 
ATGAAGAACG TTGCAGGCTA TGACGTCTCT CGTTTATTAC CAGGCTCTTT AGGGACTCTT 
GCTCTTCTAT TGGAGGCATC AGTCAAGGTT TTACCAAAGC CAGCCGCTAG CGCTACCCTG 
CGTTGCCATG TCTCACAAGC AAAGGCTCTG AAGATTCTGA ATGAATGGGC TGGTCAGCCT 
TTGCCGTTAT CAGCAAGCTG TTGGGTAGGC AAAGTAAAGG ATGGTGATGG TGAATTAACC 
ATTCGCCTGG CAGGCGCTTC GGCTGCAGTA AAGGCTGCGA TTCCATTAAT GAGTGCATCA 
GTTGATGCGC GTGAACTGGA TCCCGTCCAA GCTGAAACAT TTTGGAATGA TGTGCGCGAA 
CAAAAACTTT CTGTATTTAC CAATCTTGCA GAAAATCAAA CACTCTATCG TCTTGCACTT 
CCTGCTGCAT GCGGGTCATT GGATATTCCC AAGACAAGTG AAGACCTAGT GCTCGAATGG 
CATGGTCAAC AGCGCTGGGT TCAGGCCGAT GGAGATGATG CTACCTTCAG TACCCTCAAA 
ATATTAGCCC ATGCTCATGG CGGCCATGCG ACTCGGTTCA GACAAGGCAG TAATGTCAAC 
CCAAGCGCGC AACGTTTTAC CCTGCTATCT GAAAATACAC ACACCAAAGC CCTAGAAATA 
GTCCAAGAAC GTCTGAGATC TGCATTTGAT CCAGCTGGCG TATTTGCCAC CAAACGTCTT 
CCATAA
 
Protein sequence
MNPSNSQINA FREQILNAGK NKTSLSIEGG GTKSWYGNVN KYSKLDTRPY SGILEYQPEE 
LVITACAGTP LKEIEAALQE KNQVLAFEPP HFGENATFGG AIAAGLAGPG RITVGNFRDF 
VLGTRILDGK GQDLSFGGKV MKNVAGYDVS RLLPGSLGTL ALLLEASVKV LPKPAASATL 
RCHVSQAKAL KILNEWAGQP LPLSASCWVG KVKDGDGELT IRLAGASAAV KAAIPLMSAS 
VDARELDPVQ AETFWNDVRE QKLSVFTNLA ENQTLYRLAL PAACGSLDIP KTSEDLVLEW 
HGQQRWVQAD GDDATFSTLK ILAHAHGGHA TRFRQGSNVN PSAQRFTLLS ENTHTKALEI 
VQERLRSAFD PAGVFATKRL P