| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1746 |
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| Symbol | |
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| ID | 5053258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1817605 |
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| End bp | 1819014 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471919 |
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| Product | fumarate lyase |
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| Protein accession | YP_001156523 |
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| Protein GI | 145589926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAT CAAGCCGTCC AGAGCATGAC TTATTGGGGG ATGCCGAGGT GCCCGCCGAT
GCCTATTGGG GTATCCACAC TTTAAGGGCG ATTGAAAACT ATCCAATCAC CGGCATGGTC
ATTGGCGATT ATGCTGAACT CATAAAAGCT TTGGCGTATG TCAAGGAGGC TGCTGCTAAG
GCTAATCTCG AGTTAGGCCA TTTAGATCCC AAGAAGGCGG AAGCTATTAT TGCCGCTTGT
CATGAAATCG AATCTGGAGA GCTTCACGAT CAGTTTGTCG TAGATGTTAT TCAGGGTGGT
GCAGGAACCT CCACCAATAT GAATGCAAAT GAAGTTATTG CAAATCGGGC ATTAGAAATA
TTGGGATATG AAAAAGGGGA TTATTCCAAA CTTCATCCAA TCAATGACGT CAATATGTCG
CAAAGTACTA ATGACGTTTA CCCAACCTCA TTACGCCTAG CCACTTGTTT TGCTATTCCC
ACCTTATTAA AAGCAATGGC ATCGCTACGA GAAGCTTTCG CTGATAAGGC TGAAGAATTC
AAGGATGTTT TAAAGATTGG TAGGACGCAG CTTCAGGACG CGGTGCCAAT GACTTTGGGT
CAAGAGTTTT CCACTTATGC AGTGATGATT AAGGAGGATG AGGACCGTCT CAGCGAGGCT
ATTTCCTTAA TTGCTGAAAT TAATCTAGGG GCAACTGCAA TTGGTACGGG TATTAATACG
GATGTTCGTT ATTCCAAATG CGCCATAGAG TATTTGCAAA AAATTTCTGG TGTTGACCTC
ATTGCTTCTC CTAATCTGAT TGAAGCAACT CAGGATTGTG GCGCTTTTGT GCAACTTTCT
GGTGTCCTCA AGCGAATCGC GGTAAAGCTC TCAAAGATCT GCAATGATCT GCGTTTACTA
TCTAGCGGTC CTCAGGCTGG ACTCAATGAA ATTCGATTGC CTGCTAGAGC TGCCGGTTCA
TCCATCATGC CTGGAAAAGT AAATCCAGTG ATTCCAGAGG TAGTTAATCA AATTGCCTTT
GAAGTGATTG GTAATGATGT GACCATCACG ATGGCGGCTG AGGGCGGTCA ACTGCAGCTA
AATGCTTTTG AGCCGATCAT TGCGCATAGT CTTTTTAAGA GTATTCAGCA TTTAACCGCA
GGATGTGACA CGCTTAAAAA TCATTGTGTA GTTGGCATTA CCGCTAATCG TGAGGTTTTA
GCTGAGCGTG TCCGTACCTC TGCAGGCCTT GCTACTGCCT TAAACCCTTA TCTCGGTTAT
GAGAACGCCA CGATGATTGC CAAACGAGCG CTGCAGGAAA ATTGCTCAGT GGCAGATTTG
GTTCTTGAAC TTGGGTTAAT GGATAAAGAA ACGCTAGATA AAATTCTGAG CCCTGCTGTT
CTTACTACTC CAGGCATACA GTCAAAATAA
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| Protein sequence | MTKSSRPEHD LLGDAEVPAD AYWGIHTLRA IENYPITGMV IGDYAELIKA LAYVKEAAAK
ANLELGHLDP KKAEAIIAAC HEIESGELHD QFVVDVIQGG AGTSTNMNAN EVIANRALEI
LGYEKGDYSK LHPINDVNMS QSTNDVYPTS LRLATCFAIP TLLKAMASLR EAFADKAEEF
KDVLKIGRTQ LQDAVPMTLG QEFSTYAVMI KEDEDRLSEA ISLIAEINLG ATAIGTGINT
DVRYSKCAIE YLQKISGVDL IASPNLIEAT QDCGAFVQLS GVLKRIAVKL SKICNDLRLL
SSGPQAGLNE IRLPARAAGS SIMPGKVNPV IPEVVNQIAF EVIGNDVTIT MAAEGGQLQL
NAFEPIIAHS LFKSIQHLTA GCDTLKNHCV VGITANREVL AERVRTSAGL ATALNPYLGY
ENATMIAKRA LQENCSVADL VLELGLMDKE TLDKILSPAV LTTPGIQSK
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